RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 INS-IGF2F8WCM5 200 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 GSTZ1O43708 216 aaPredicted RBP14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 CDS2O95674 445 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 TFPI2P48307 235 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 SPCS3P61009 180 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 RNF2Q99496 336 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 HEYLQ9NQ87 328 aaPredicted RBP14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 CEBPZOSA8MTT3 80 aa14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 CHEK1O14757 476 aa14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 RNASE2P10153 161 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 FAUP35544 74 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 ZNF600Q6ZNG1 722 aa14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 GLYATL2Q8WU03 294 aa14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 OR10C1Q96KK4 312 aa14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 GPR132Q9UNW8 380 aa14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 KCNIP3Q9Y2W7 256 aa14.8□□□□□ -0.04
SHROOM1-204ENST00000440118 TNFSF8P32971 234 aa14.79□□□□□ -0.04
SHROOM1-204ENST00000440118 TOMM20LQ6UXN7 152 aa14.79□□□□□ -0.04
SHROOM1-204ENST00000440118 SELENOHQ8IZQ5 122 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-204ENST00000440118 LHFPL5Q8TAF8 219 aa14.79□□□□□ -0.04
SHROOM1-204ENST00000440118 PUS1Q9Y606 427 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHROOM1-204ENST00000440118 RPS10-NUDT3A0A1W2PQS6 291 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 NXPH3O95157 252 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 AKR1C4P17516 323 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 HTR2BP41595 481 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 RPL11P62913 178 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 PAFAH1B2P68402 229 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 ODF3L2Q3SX64 289 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 PYDC2Q56P42 97 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 SPANXN2Q5MJ10 180 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 Q6ZRM9 215 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 OR52E5Q8NH55 327 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 TMEM231Q9H6L2 316 aa14.78□□□□□ -0.04
SHROOM1-204ENST00000440118 TENM2Q9NT68 2774 aa14.77□□□□□ -0.04
SHROOM1-204ENST00000440118 ANXA3P12429 323 aa14.77□□□□□ -0.05
SHROOM1-204ENST00000440118 RPL35AP18077 110 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-204ENST00000440118 AP3S2P59780 193 aa14.77□□□□□ -0.05
SHROOM1-204ENST00000440118 TCF24Q7RTU0 167 aa14.77□□□□□ -0.05
SHROOM1-204ENST00000440118 GBGT1Q8N5D6 347 aa14.77□□□□□ -0.05
SHROOM1-204ENST00000440118 SLC24A4Q8NFF2 622 aa14.77□□□□□ -0.05
SHROOM1-204ENST00000440118 GPR146Q96CH1 333 aa14.77□□□□□ -0.05
SHROOM1-204ENST00000440118 CACFD1Q9UGQ2 172 aa14.77□□□□□ -0.05
SHROOM1-204ENST00000440118 DYNC2H1Q8NCM8 4307 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 CLN5O75503 358 aa14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 CD5P06127 495 aa14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 SULT1A3P0DMM9 295 aa14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 SULT1A4P0DMN0 295 aa14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 CMC4P56277 68 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 DEFB135Q30KP9 77 aa14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 STPG3Q8N7X2 389 aa14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 TMEM230Q96A57 120 aa14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 NARS2Q96I59 477 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 PRR13Q9NZ81 148 aa14.76□□□□□ -0.05
SHROOM1-204ENST00000440118 IGHV3-66A0A0C4DH42 116 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 DNASE2O00115 360 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 TMEM50AO95807 157 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 SRPXP78539 464 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 TMED4Q7Z7H5 227 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 TOMM5Q8N4H5 51 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 OR4X1Q8NH49 305 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 ST8SIA2Q92186 375 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 IL22RA2Q969J5 263 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 GALNT14Q96FL9 552 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 METTL26Q96S19 204 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 TMEM56-RWDD3S4R434 201 aa14.75□□□□□ -0.05
SHROOM1-204ENST00000440118 UBE2CO00762 179 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 AARDQ4LEZ3 155 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 PVRIGQ6DKI7 326 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 WFDC3Q8IUB2 231 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 APRG1Q8IVJ8 170 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 ZNF414Q96IQ9 312 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 OVOL2Q9BRP0 275 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 FNDC4Q9H6D8 234 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 ZFAND3Q9H8U3 227 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 CSMD3Q7Z407 3707 aa14.74□□□□□ -0.05
SHROOM1-204ENST00000440118 TRAV30A0A087WSZ9 112 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 PIGBOS1A0A0B4J2F0 54 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 LCE6AA0A183 80 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 A0A1W2PS18 150 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 SPRY2O43597 315 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 NPPCP23582 126 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 NPY1RP25929 384 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 TMEM187Q14656 261 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 BSXQ3C1V8 233 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 Q6ZWC4 215 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 NOXA1Q86UR1 476 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 LGI3Q8N145 548 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 MRPL36Q9P0J6 103 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 RABAC1Q9UI14 185 aa14.73□□□□□ -0.05
SHROOM1-204ENST00000440118 A0A0B4J2A0 478 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 KIR2DL5BA0A0G2JN68 375 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 KIR2DL5BA0A0G2JPC4 375 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 A0A1B0GU03 582 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 IFNA10P01566 189 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 SLC25A4P12235 298 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 RND2P52198 227 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 DEFA1P59665 94 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 DEFA3P59666 94 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 MLANAQ16655 118 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 TIGITQ495A1 244 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms