RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 HAGHQ16775 308 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 GGNBP1Q5YKI7 109 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 PLET1Q6UQ28 207 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 UNQ9165/PRO28630Q6UXU0 137 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 ADAMTSL5Q6ZMM2 481 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 LYG2Q86SG7 212 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 LRTM2Q8N967 370 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 OR52E5Q8NH55 327 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 NUDT15Q9NV35 164 aa12.13□□□□□ -0.47
ITGB1-207ENST00000439974 A0A1B0GU03 582 aa12.12□□□□□ -0.47
ITGB1-207ENST00000439974 TGOLN2O43493 480 aa12.12□□□□□ -0.47
ITGB1-207ENST00000439974 TNFRSF9Q07011 255 aa12.12□□□□□ -0.47
ITGB1-207ENST00000439974 ZFAND6Q6FIF0 208 aa12.12□□□□□ -0.47
ITGB1-207ENST00000439974 OR1L6Q8NGR2 347 aa12.12□□□□□ -0.47
ITGB1-207ENST00000439974 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
ITGB1-207ENST00000439974 SEC22CQ9BRL7 303 aa12.12□□□□□ -0.47
ITGB1-207ENST00000439974 MAGT1Q9H0U3 335 aa12.12□□□□□ -0.47
ITGB1-207ENST00000439974 MRPL36Q9P0J6 103 aaKnown RBP12.12□□□□□ -0.47
ITGB1-207ENST00000439974 PLECQ15149 4684 aaKnown RBP12.11□□□□□ -0.47
ITGB1-207ENST00000439974 FAM240BA0A1B0GVZ2 78 aa12.11□□□□□ -0.47
ITGB1-207ENST00000439974 INS-IGF2F8WCM5 200 aa12.11□□□□□ -0.47
ITGB1-207ENST00000439974 ZNF207O43670 478 aaKnown RBP12.11□□□□□ -0.47
ITGB1-207ENST00000439974 IAPPP10997 89 aa12.11□□□□□ -0.47
ITGB1-207ENST00000439974 ADMP35318 185 aa12.11□□□□□ -0.47
ITGB1-207ENST00000439974 ASAH1Q13510 395 aa12.11□□□□□ -0.47
ITGB1-207ENST00000439974 CD300EQ496F6 205 aaPredicted RBP12.11□□□□□ -0.47
ITGB1-207ENST00000439974 TM4SF20Q53R12 229 aa12.11□□□□□ -0.47
ITGB1-207ENST00000439974 DYNLRB2Q8TF09 96 aa12.11□□□□□ -0.47
ITGB1-207ENST00000439974 FNDC4Q9H6D8 234 aaPredicted RBP12.11□□□□□ -0.47
ITGB1-207ENST00000439974 HSPB7Q9UBY9 170 aa12.11□□□□□ -0.47
ITGB1-207ENST00000439974 DUXBA0A1W2PPF3 345 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 C2orf70A6NJV1 201 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 PITX3O75364 302 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 SUB1P53999 127 aaKnown RBP eCLIP12.1□□□□□ -0.47
ITGB1-207ENST00000439974 MFAP4P55083 255 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 BSXQ3C1V8 233 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 MZT2BQ6NZ67 158 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 GPHB5Q86YW7 130 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 SLC24A4Q8NFF2 622 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 COQ8AQ8NI60 647 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 DTD1Q8TEA8 209 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 ZNF414Q96IQ9 312 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 HYDINQ4G0P3 5121 aa12.1□□□□□ -0.47
ITGB1-207ENST00000439974 LCE6AA0A183 80 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 CCSO14618 274 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 IFNA10P01566 189 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 CTSGP08311 255 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 H2AFB2P0C5Z0 115 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 FOLR2P14207 255 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 OPRK1P41145 380 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 CD81P60033 236 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 FAM106AQ4KMX7 169 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 PVRIGQ6DKI7 326 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 UXS1Q8NBZ7 420 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 BSCL2Q96G97 398 aaPredicted RBP12.09□□□□□ -0.47
ITGB1-207ENST00000439974 C20orf24Q9BUV8 137 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 TMED3Q9Y3Q3 217 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 EPPK1P58107 5090 aaKnown RBP12.09□□□□□ -0.47
ITGB1-207ENST00000439974 BIRC6Q9NR09 4857 aa12.09□□□□□ -0.47
ITGB1-207ENST00000439974 TMEM213A2RRL7 107 aa12.08□□□□□ -0.48
ITGB1-207ENST00000439974 NPY1RP25929 384 aa12.08□□□□□ -0.48
ITGB1-207ENST00000439974 HTR2BP41595 481 aa12.08□□□□□ -0.48
ITGB1-207ENST00000439974 DEFB114Q30KQ6 69 aa12.08□□□□□ -0.48
ITGB1-207ENST00000439974 NEURL2Q9BR09 285 aa12.08□□□□□ -0.48
ITGB1-207ENST00000439974 ZNF436Q9C0F3 470 aaPredicted RBP12.08□□□□□ -0.48
ITGB1-207ENST00000439974 HIPK2Q9H2X6 1198 aa12.08□□□□□ -0.48
ITGB1-207ENST00000439974 PAIP2BQ9ULR5 123 aaKnown RBP12.08□□□□□ -0.48
ITGB1-207ENST00000439974 ZNF785A8K8V0 405 aa12.07□□□□□ -0.48
ITGB1-207ENST00000439974 LGALS9O00182 355 aa12.07□□□□□ -0.48
ITGB1-207ENST00000439974 GNG7O60262 68 aa12.07□□□□□ -0.48
ITGB1-207ENST00000439974 C2orf83Q53S99 150 aa12.07□□□□□ -0.48
ITGB1-207ENST00000439974 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
ITGB1-207ENST00000439974 DUSP18Q8NEJ0 188 aa12.07□□□□□ -0.48
ITGB1-207ENST00000439974 ENKURQ8TC29 256 aa12.07□□□□□ -0.48
ITGB1-207ENST00000439974 MITD1Q8WV92 249 aa12.07□□□□□ -0.48
ITGB1-207ENST00000439974 OR10C1Q96KK4 312 aa12.07□□□□□ -0.48
ITGB1-207ENST00000439974 TECRQ9NZ01 308 aaKnown RBP12.07□□□□□ -0.48
ITGB1-207ENST00000439974 IGHV3-49A0A0A0MS15 119 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 WRBO00258 174 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 NUPL2O15504 423 aaKnown RBP12.06□□□□□ -0.48
ITGB1-207ENST00000439974 YIF1AO95070 293 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 CD7P09564 240 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 CBLN1P23435 193 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 GUCA2BQ16661 112 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 SPSB3Q6PJ21 355 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 NRARPQ7Z6K4 114 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 TMEM190Q8WZ59 177 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 GAR1Q9NY12 217 aaKnown RBP12.06□□□□□ -0.48
ITGB1-207ENST00000439974 MLXQ9UH92 298 aa12.06□□□□□ -0.48
ITGB1-207ENST00000439974 FAM25EA8MYX2 175 aa12.05□□□□□ -0.48
ITGB1-207ENST00000439974 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
ITGB1-207ENST00000439974 IFNA21P01568 189 aa12.05□□□□□ -0.48
ITGB1-207ENST00000439974 SLC25A6P12236 298 aa12.05□□□□□ -0.48
ITGB1-207ENST00000439974 POLR2GP62487 172 aaKnown RBP eCLIP12.05□□□□□ -0.48
ITGB1-207ENST00000439974 TIGITQ495A1 244 aa12.05□□□□□ -0.48
ITGB1-207ENST00000439974 BTNL8Q6UX41 500 aa12.05□□□□□ -0.48
ITGB1-207ENST00000439974 ZNF431Q8TF32 576 aaPredicted RBP12.05□□□□□ -0.48
ITGB1-207ENST00000439974 RETNQ9HD89 108 aa12.05□□□□□ -0.48
ITGB1-207ENST00000439974 GSKIPQ9P0R6 139 aa12.05□□□□□ -0.48
ITGB1-207ENST00000439974 IGHV3OR16-13A0A075B7E8 117 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms