RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 MEIG1Q5JSS6 88 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF767PQ75MW2 155 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 PDPNQ86YL7 162 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 FER1L6-AS1Q8NA97 138 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 OR5D14Q8NGL3 314 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 OR5H2Q8NGV7 314 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 STAG3L4Q8TBR4 150 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 RNASE6Q93091 150 aaKnown RBP2.58□□□□□ -2
HMGB1P12-201ENST00000438594 MAL2Q969L2 176 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 MAGOHBQ96A72 148 aaKnown RBP2.58□□□□□ -2
HMGB1P12-201ENST00000438594 SYT15Q9BQS2 421 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 PYGO2Q9BRQ0 406 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 CHAC1Q9BUX1 264 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 TMEM191AQ9H0A3 160 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 CKLFQ9UBR5 152 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 MARCOQ9UEW3 520 aaPredicted RBP2.58□□□□□ -2
HMGB1P12-201ENST00000438594 CACNG5Q9UF02 275 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 V9GYS6 101 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 PLA2R1Q13018 1463 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 EFCAB6Q5THR3 1501 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 SYCP2Q9BX26 1530 aa2.58□□□□□ -2
HMGB1P12-201ENST00000438594 ABCA6Q8N139 1617 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 ZC3H13Q5T200 1668 aaKnown RBP2.57□□□□□ -2
HMGB1P12-201ENST00000438594 IGHV3-72A0A0B4J1Y9 119 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 IGHV1-58A0A0C4DH39 117 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 A0A0D9SEW6 157 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 A0A1B0GVY2 172 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 IRGMA1A4Y4 181 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 C7orf71A4D174 169 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF860A6NHJ4 632 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF727A8MUV8 499 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 BUB1B-PAK6H3BSN5 160 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 BMPR1BO00238 502 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 UBFD1O14562 309 aaKnown RBP2.57□□□□□ -2
HMGB1P12-201ENST00000438594 CDC42EP2O14613 210 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 NAPSAO96009 420 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 CRYGSP22914 178 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 RPL22P35268 128 aaKnown RBP2.57□□□□□ -2
HMGB1P12-201ENST00000438594 GUCA1AP43080 201 aaPredicted RBP2.57□□□□□ -2
HMGB1P12-201ENST00000438594 S100A10P60903 97 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 GNB1P62873 340 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 PLGLB1Q02325 96 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 BSPH1Q075Z2 132 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 DIAPH2-AS1Q14236 149 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 MPV17L2Q567V2 206 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 PYY3Q5JQD4 70 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 FAM182AQ5T1J6 154 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 RPL22L1Q6P5R6 122 aaKnown RBP2.57□□□□□ -2
HMGB1P12-201ENST00000438594 LCN15Q6UWW0 184 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 GTF2H5Q6ZYL4 71 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 SCXQ7RTU7 201 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 LINC00305Q7Z4B0 112 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 TRAPPC6BQ86SZ2 158 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 SMIM29Q86T20 159 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 SAXO1Q8IYX7 474 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 C5orf17Q8NAS9 161 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 PLPP5Q8NEB5 264 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 OR4A5Q8NH83 315 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 BRK1Q8WUW1 75 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 TMEM158Q8WZ71 300 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 ADAT1Q9BUB4 502 aaKnown RBP2.57□□□□□ -2
HMGB1P12-201ENST00000438594 TSSK6Q9BXA6 273 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 FGF23Q9GZV9 251 aaPredicted RBP2.57□□□□□ -2
HMGB1P12-201ENST00000438594 PLXND1Q9Y4D7 1925 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 DOCK6Q96HP0 2047 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 RTEL1-TNFRSF6BF6WH68 1400 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 PTPRTO14522 1441 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 TRAPPC8Q9Y2L5 1435 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 PLEKHH2Q8IVE3 1493 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 ADGRB3O60242 1522 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 CFAP74Q9C0B2 1584 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 MAP3K4Q9Y6R4 1608 aa2.57□□□□□ -2
HMGB1P12-201ENST00000438594 KIDINS220Q9ULH0 1771 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 MYO5BQ9ULV0 1848 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 MYH11P35749 1972 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 IGKV3D-20A0A0C4DH25 116 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 BBIP1A8MTZ0 92 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 C9JCJ5 164 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 FNDC10F2Z333 226 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 I3L521 148 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 SOCS3O14543 225 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 KRASP01116 189 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 LGALS3P17931 250 aaKnown RBP2.56□□□□□ -2
HMGB1P12-201ENST00000438594 HIST1H2BOP23527 126 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 HIST1H2BBP33778 126 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF136P52737 540 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 CRIP2P52943 208 aaPredicted RBP2.56□□□□□ -2
HMGB1P12-201ENST00000438594 HIST1H2BDP58876 126 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 HIST1H2BCP62807 126 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 BTG2P78543 158 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 CCL20P78556 96 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 QRFPP83859 136 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 HIST2H2BEQ16778 126 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 TMEM183BQ1AE95 376 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.56□□□□□ -2
HMGB1P12-201ENST00000438594 GUSBP11Q6P575 273 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 SLC35E3Q7Z769 313 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 SLC25A42Q86VD7 318 aa2.56□□□□□ -2
HMGB1P12-201ENST00000438594 RPS19BP1Q86WX3 136 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms