RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 IGHV1-46P01743 117 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 EFNA4P52798 201 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 DENND4CQ5VZ89 1909 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 ST6GALNAC3Q8NDV1 305 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 J3QRE1 110 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 SMIM13P0DJ93 91 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 CCL3L1P16619 93 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 RHOGP84095 191 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 ZNF407Q9C0G0 2248 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 GHRHP01286 108 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 PRCDQ00LT1 54 aa13.22□□□□□ -0.29
PTPN13-204ENST00000436978 CBLN1P23435 193 aa13.21□□□□□ -0.29
PTPN13-204ENST00000436978 GCSAMLQ5JQS6 135 aa13.21□□□□□ -0.29
PTPN13-204ENST00000436978 ZNF324BQ6AW86 544 aaPredicted RBP13.21□□□□□ -0.29
PTPN13-204ENST00000436978 NEUROG1Q92886 237 aa13.21□□□□□ -0.29
PTPN13-204ENST00000436978 TRGV11A0A075B6L2 103 aa13.21□□□□□ -0.29
PTPN13-204ENST00000436978 SOD3P08294 240 aa13.21□□□□□ -0.29
PTPN13-204ENST00000436978 CFAP161Q6P656 301 aa13.21□□□□□ -0.29
PTPN13-204ENST00000436978 F11RQ9Y624 299 aaKnown RBP13.21□□□□□ -0.29
PTPN13-204ENST00000436978 PINLYPA6NC86 204 aa13.21□□□□□ -0.29
PTPN13-204ENST00000436978 MPZP25189 248 aa13.21□□□□□ -0.29
PTPN13-204ENST00000436978 OOSP1A8MZH6 123 aa13.21□□□□□ -0.3
PTPN13-204ENST00000436978 PLP1P60201 277 aa13.21□□□□□ -0.3
PTPN13-204ENST00000436978 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.3
PTPN13-204ENST00000436978 VMO1Q7Z5L0 202 aa13.21□□□□□ -0.3
PTPN13-204ENST00000436978 CACNA1EQ15878 2313 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 TRAV21A0A0B4J279 112 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 ZP1P60852 638 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 MIR17HGQ75NE6 70 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 DTX1Q86Y01 620 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 TRAV40A0A0B4J280 105 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 CD7P09564 240 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 ZNF525Q8N782 197 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 ZGRF1Q86YA3 2104 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 MED12Q93074 2177 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 TMEM42Q69YG0 159 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 OR13C6PQ8NH95 151 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 ACACAQ13085 2346 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 PAX8Q06710 450 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 M0R1W7 72 aa13.2□□□□□ -0.3
PTPN13-204ENST00000436978 HOXA5P20719 270 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 CNTFRP26992 372 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 WFIKKN1Q96NZ8 548 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 IGHV2-26A0A0B4J1V2 119 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 RBMY1BA6NDE4 496 aaKnown RBP13.19□□□□□ -0.3
PTPN13-204ENST00000436978 RBMY1EA6NEQ0 496 aaKnown RBP13.19□□□□□ -0.3
PTPN13-204ENST00000436978 RBMY1DP0C7P1 496 aaKnown RBP13.19□□□□□ -0.3
PTPN13-204ENST00000436978 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
PTPN13-204ENST00000436978 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 DUTP33316 252 aaKnown RBP13.19□□□□□ -0.3
PTPN13-204ENST00000436978 C17orf82Q86X59 251 aaPredicted RBP13.19□□□□□ -0.3
PTPN13-204ENST00000436978 APOHP02749 345 aaPredicted RBP13.19□□□□□ -0.3
PTPN13-204ENST00000436978 GRIFINA4D1Z8 144 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 DPRXA6NFQ7 191 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 HIGD1CA8MV81 97 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 KIAA1644Q3SXP7 199 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 IGHV3-11P01762 117 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 C8orf46Q8TAG6 207 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 LYPD3O95274 346 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 NUDT10Q8NFP7 164 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 DMRTA2Q96SC8 542 aa13.19□□□□□ -0.3
PTPN13-204ENST00000436978 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-204ENST00000436978 OR9G9P0C7N8 305 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 OVOL1O14753 267 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 FAM89BQ8N5H3 189 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 CEP192Q8TEP8 1941 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 TRBV7-1A0A0A6YYK4 115 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
PTPN13-204ENST00000436978 CARHSP1Q9Y2V2 147 aaKnown RBP13.18□□□□□ -0.3
PTPN13-204ENST00000436978 CRYGSP22914 178 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 FOXF2Q12947 444 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 TDGF1P13385 188 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 NAT1P18440 290 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 OR5AN1Q8NGI8 311 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 RNF5Q99942 180 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 JKAMPQ9P055 326 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 ST20Q9HBF5 79 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 UNQ6494/PRO21346Q6UXR6 183 aa13.18□□□□□ -0.3
PTPN13-204ENST00000436978 TIMM23O14925 209 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 OTX1P32242 354 aaPredicted RBP13.17□□□□□ -0.3
PTPN13-204ENST00000436978 ZNF672Q499Z4 452 aaPredicted RBP13.17□□□□□ -0.3
PTPN13-204ENST00000436978 WNK2Q9Y3S1 2297 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 TRAV41A0A0B4J266 112 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 TMEM178BH3BS89 294 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 TBL2Q9Y4P3 447 aaKnown RBP13.17□□□□□ -0.3
PTPN13-204ENST00000436978 C2orf16Q68DN1 1984 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 SRRM5B3KS81 715 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 F2Z2F3 143 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 TCF21O43680 179 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 EMP1P54849 157 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 SDHCQ99643 169 aaPredicted RBP13.17□□□□□ -0.3
PTPN13-204ENST00000436978 IMMP2LQ96T52 175 aa13.17□□□□□ -0.3
PTPN13-204ENST00000436978 IFI27P40305 119 aaPredicted RBP13.17□□□□□ -0.3
PTPN13-204ENST00000436978 ZNF98A6NK75 572 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 B4DSR2 109 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 MBNL3Q9NUK0 354 aaKnown RBP13.16□□□□□ -0.3
PTPN13-204ENST00000436978 FAM71F2Q6NXP2 309 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 A0A0G2JNJ9 132 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 Q9UFV3 132 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms