RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 C11orf94C9JXX5 98 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 DEDDO75618 318 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 CD3DP04234 171 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 PI3P19957 117 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 OPRK1P41145 380 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 RPL5P46777 297 aaKnown RBP10.88□□□□□ -0.67
MSH5-208ENST00000429846 TRIM16LQ309B1 348 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 LEMD1Q68G75 181 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 LILRB2Q8N423 598 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 OR4X1Q8NH49 305 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 ZFAND1Q8TCF1 268 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 C2CD4CQ8TF44 421 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 RRNAD1Q96FB5 475 aaKnown RBP10.88□□□□□ -0.67
MSH5-208ENST00000429846 GRAMD2BQ96HH9 432 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 NARS2Q96I59 477 aaKnown RBP10.88□□□□□ -0.67
MSH5-208ENST00000429846 HRH4Q9H3N8 390 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 KLK11Q9UBX7 282 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 RABAC1Q9UI14 185 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 KMT2AQ03164 3969 aa10.87□□□□□ -0.67
MSH5-208ENST00000429846 TRAV30A0A087WSZ9 112 aa10.87□□□□□ -0.67
MSH5-208ENST00000429846 SPP1P10451 314 aa10.87□□□□□ -0.67
MSH5-208ENST00000429846 UCP1P25874 307 aa10.87□□□□□ -0.67
MSH5-208ENST00000429846 CRYBB3P26998 211 aa10.87□□□□□ -0.67
MSH5-208ENST00000429846 BSXQ3C1V8 233 aa10.87□□□□□ -0.67
MSH5-208ENST00000429846 FAM219AQ8IW50 185 aa10.87□□□□□ -0.67
MSH5-208ENST00000429846 RNASE11Q8TAA1 199 aaKnown RBP10.87□□□□□ -0.67
MSH5-208ENST00000429846 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
MSH5-208ENST00000429846 MTFP1Q9UDX5 166 aa10.87□□□□□ -0.67
MSH5-208ENST00000429846 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 RPS10-NUDT3A0A1W2PQS6 291 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 K7EQG2 157 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 CD74P04233 296 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 ETV6P41212 452 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 P2RY1P47900 373 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 EIF2B2P49770 351 aaKnown RBP10.86□□□□□ -0.67
MSH5-208ENST00000429846 PPP5CP53041 499 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 AARDQ4LEZ3 155 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 RNASE12Q5GAN4 147 aaKnown RBP10.86□□□□□ -0.67
MSH5-208ENST00000429846 MORN3Q6PF18 240 aaPredicted RBP10.86□□□□□ -0.67
MSH5-208ENST00000429846 TRPT1Q86TN4 253 aaKnown RBP10.86□□□□□ -0.67
MSH5-208ENST00000429846 FAM24BQ8N5W8 94 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 Q8NAQ8 132 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 STXBP6Q8NFX7 210 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 TERB2Q8NHR7 220 aa10.86□□□□□ -0.67
MSH5-208ENST00000429846 FRAS1Q86XX4 4008 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 MIFP14174 115 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 HTR2BP41595 481 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 TAS2R19P59542 299 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 SPCS3P61009 180 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 OR13C8Q8NGS7 320 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 OR52E5Q8NH55 327 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 OR52I2Q8NH67 350 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 TMEM230Q96A57 120 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 EXTL2Q9UBQ6 330 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 AGRNO00468 2067 aa10.85□□□□□ -0.67
MSH5-208ENST00000429846 DEFB4AO15263 64 aa10.84□□□□□ -0.67
MSH5-208ENST00000429846 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
MSH5-208ENST00000429846 ZNF182P17025 639 aaPredicted RBP10.84□□□□□ -0.67
MSH5-208ENST00000429846 SSBP1Q04837 148 aaKnown RBP10.84□□□□□ -0.67
MSH5-208ENST00000429846 SP6Q3SY56 376 aa10.84□□□□□ -0.67
MSH5-208ENST00000429846 SCGB2B2Q4G0G5 96 aa10.84□□□□□ -0.67
MSH5-208ENST00000429846 TMEM229BQ8NBD8 167 aa10.84□□□□□ -0.67
MSH5-208ENST00000429846 DCANP1Q8TF63 244 aa10.84□□□□□ -0.67
MSH5-208ENST00000429846 TMEM222Q9H0R3 208 aa10.84□□□□□ -0.67
MSH5-208ENST00000429846 MRPL36Q9P0J6 103 aaKnown RBP10.84□□□□□ -0.67
MSH5-208ENST00000429846 A0A0G2JRQ6 117 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 HELTA6NFD8 242 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 ZNF705EA8MWA4 302 aaPredicted RBP10.83□□□□□ -0.68
MSH5-208ENST00000429846 GABARAPO95166 117 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 CDS2O95674 445 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 RAB3DO95716 219 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 ZNF688P0C7X2 276 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 SLC25A4P12235 298 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 AP2S1P53680 142 aaPredicted RBP10.83□□□□□ -0.68
MSH5-208ENST00000429846 SURF2Q15527 256 aaPredicted RBP10.83□□□□□ -0.68
MSH5-208ENST00000429846 OR4D10Q8NGI6 311 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 RBPMSQ93062 196 aaKnown RBP10.83□□□□□ -0.68
MSH5-208ENST00000429846 ABHD1Q96SE0 405 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.83□□□□□ -0.68
MSH5-208ENST00000429846 CACFD1Q9UGQ2 172 aa10.83□□□□□ -0.68
MSH5-208ENST00000429846 C14orf166Q9Y224 244 aaKnown RBP10.83□□□□□ -0.68
MSH5-208ENST00000429846 IGHV4-28A0A0C4DH34 117 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 GABARAPH6UMI1 98 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 GIG44P09565 113 aaPredicted RBP10.82□□□□□ -0.68
MSH5-208ENST00000429846 OR5AC1P0C628 307 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 IGLC1P0CG04 106 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 YPEL3P61236 119 aaPredicted RBP10.82□□□□□ -0.68
MSH5-208ENST00000429846 MRPS10P82664 201 aaKnown RBP10.82□□□□□ -0.68
MSH5-208ENST00000429846 MEF2DQ14814 521 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 TIGITQ495A1 244 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 C2orf83Q53S99 150 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 STEAP1BQ6NZ63 245 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 CENPSQ8N2Z9 138 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 OR1S2Q8NGQ3 325 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 MARCH1Q8TCQ1 289 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 RNASEH2CQ8TDP1 164 aaKnown RBP10.82□□□□□ -0.68
MSH5-208ENST00000429846 U3KQE9 123 aa10.82□□□□□ -0.68
MSH5-208ENST00000429846 IGLL5B9A064 214 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 HNRNPCP07910 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
MSH5-208ENST00000429846 C4BPBP20851 252 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms