RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 STEAP1BQ6NZ63 245 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 LILRB2Q8N423 598 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 TMEM229BQ8NBD8 167 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 TERB2Q8NHR7 220 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 MIXL1Q9H2W2 232 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 FNDC4Q9H6D8 234 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-209ENST00000428728 VSIRQ9H7M9 311 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 MRPL36Q9P0J6 103 aaKnown RBP12.55□□□□□ -0.4
TRIM39-209ENST00000428728 KLK5Q9Y337 293 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-209ENST00000428728 CA1P00915 261 aaPredicted RBP12.54□□□□□ -0.4
TRIM39-209ENST00000428728 CD74P04233 296 aa12.54□□□□□ -0.4
TRIM39-209ENST00000428728 CD5P06127 495 aa12.54□□□□□ -0.4
TRIM39-209ENST00000428728 OR5AC1P0C628 307 aa12.54□□□□□ -0.4
TRIM39-209ENST00000428728 ATF4P18848 351 aaPredicted RBP12.54□□□□□ -0.4
TRIM39-209ENST00000428728 DEFB131AP59861 70 aa12.54□□□□□ -0.4
TRIM39-209ENST00000428728 FAM24BQ8N5W8 94 aa12.54□□□□□ -0.4
TRIM39-209ENST00000428728 RARRES2Q99969 163 aa12.54□□□□□ -0.4
TRIM39-209ENST00000428728 TMEM231Q9H6L2 316 aa12.54□□□□□ -0.4
TRIM39-209ENST00000428728 RABAC1Q9UI14 185 aa12.54□□□□□ -0.4
TRIM39-209ENST00000428728 MLANAQ16655 118 aa12.53□□□□□ -0.4
TRIM39-209ENST00000428728 PVRIGQ6DKI7 326 aa12.53□□□□□ -0.4
TRIM39-209ENST00000428728 OR11H2Q8NH07 326 aa12.53□□□□□ -0.4
TRIM39-209ENST00000428728 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
TRIM39-209ENST00000428728 GATAD1Q8WUU5 269 aa12.53□□□□□ -0.4
TRIM39-209ENST00000428728 PHLDA1Q8WV24 401 aaPredicted RBP12.53□□□□□ -0.4
TRIM39-209ENST00000428728 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
TRIM39-209ENST00000428728 GABARAPH6UMI1 98 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 CLN5O75503 358 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 NPPCP23582 126 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 Q6ZRM9 215 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 STXBP6Q8NFX7 210 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 METTL26Q96S19 204 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 TMEM222Q9H0R3 208 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 FBXL17Q9UF56 701 aa12.52□□□□□ -0.41
TRIM39-209ENST00000428728 PLECQ15149 4684 aaKnown RBP12.52□□□□□ -0.41
TRIM39-209ENST00000428728 TEX13DA0A0J9YY54 714 aaPredicted RBP12.51□□□□□ -0.41
TRIM39-209ENST00000428728 SCGB2A1O75556 95 aa12.51□□□□□ -0.41
TRIM39-209ENST00000428728 B3GALNT1O75752 331 aa12.51□□□□□ -0.41
TRIM39-209ENST00000428728 NANOS2P60321 138 aaKnown RBP12.51□□□□□ -0.41
TRIM39-209ENST00000428728 MEF2DQ14814 521 aa12.51□□□□□ -0.41
TRIM39-209ENST00000428728 TIGITQ495A1 244 aa12.51□□□□□ -0.41
TRIM39-209ENST00000428728 OR4X1Q8NH49 305 aa12.51□□□□□ -0.41
TRIM39-209ENST00000428728 TMEM230Q96A57 120 aa12.51□□□□□ -0.41
TRIM39-209ENST00000428728 NAA60Q9H7X0 242 aa12.51□□□□□ -0.41
TRIM39-209ENST00000428728 TRAV2A0A0B4J234 112 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 CTDSP2O14595 271 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 DEFB4AO15263 64 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 NXPH3O95157 252 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 P2RY1P47900 373 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 SPCS3P61009 180 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 SPCS2Q15005 226 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 BSXQ3C1V8 233 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 GPR141Q7Z602 305 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 STHQ8IWL8 128 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 OR4C16Q8NGL9 310 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 GLYATL2Q8WU03 294 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 SMIM4Q8WVI0 70 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 RBPMSQ93062 196 aaKnown RBP12.5□□□□□ -0.41
TRIM39-209ENST00000428728 RTBDNQ9BSG5 229 aaPredicted RBP12.5□□□□□ -0.41
TRIM39-209ENST00000428728 MRPS26Q9BYN8 205 aaKnown RBP12.5□□□□□ -0.41
TRIM39-209ENST00000428728 C11orf68Q9H3H3 251 aaKnown RBP12.5□□□□□ -0.41
TRIM39-209ENST00000428728 HEYLQ9NQ87 328 aaPredicted RBP12.5□□□□□ -0.41
TRIM39-209ENST00000428728 CACNG5Q9UF02 275 aa12.5□□□□□ -0.41
TRIM39-209ENST00000428728 RPS10-NUDT3A0A1W2PQS6 291 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 A0A1W2PS18 150 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 DISC1C4P0D8 188 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 CDS2O95674 445 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 IGKV1-17P01599 117 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 ZNF688P0C7X2 276 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 RPL5P46777 297 aaKnown RBP12.49□□□□□ -0.41
TRIM39-209ENST00000428728 MRPS10P82664 201 aaKnown RBP12.49□□□□□ -0.41
TRIM39-209ENST00000428728 SSBP1Q04837 148 aaKnown RBP12.49□□□□□ -0.41
TRIM39-209ENST00000428728 TMEM187Q14656 261 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 RBMS2Q15434 407 aaKnown RBP12.49□□□□□ -0.41
TRIM39-209ENST00000428728 TMEM268Q5VZI3 342 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 FAM219AQ8IW50 185 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 SELENOHQ8IZQ5 122 aaKnown RBP12.49□□□□□ -0.41
TRIM39-209ENST00000428728 C11orf45Q8TAV5 145 aa12.49□□□□□ -0.41
TRIM39-209ENST00000428728 NARS2Q96I59 477 aaKnown RBP12.49□□□□□ -0.41
TRIM39-209ENST00000428728 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-209ENST00000428728 BIRC6Q9NR09 4857 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 CEBPZOSA8MTT3 80 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 K7EQG2 157 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 AKAIN1P0CW23 69 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 CRYBB3P26998 211 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 HTR2BP41595 481 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 RND2P52198 227 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 IL18Q14116 193 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 MFFQ9GZY8 342 aa12.48□□□□□ -0.41
TRIM39-209ENST00000428728 CRYM-AS1A6NIL9 109 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 DEDDO75618 318 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 ALDH3B2P48448 385 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 DHODHQ02127 395 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 SURF2Q15527 256 aaPredicted RBP12.47□□□□□ -0.41
TRIM39-209ENST00000428728 AARDQ4LEZ3 155 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 RPP25LQ8N5L8 163 aaKnown RBP12.47□□□□□ -0.41
TRIM39-209ENST00000428728 SLC24A4Q8NFF2 622 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 OR1S2Q8NGQ3 325 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms