RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 IGLV3-21P80748 117 aaPredicted RBP12.15□□□□□ -0.46
PTPN13-203ENST00000427191 FNDC4Q9H6D8 234 aaPredicted RBP12.15□□□□□ -0.46
PTPN13-203ENST00000427191 LINC00271P0C7V0 271 aa12.15□□□□□ -0.46
PTPN13-203ENST00000427191 RPL23P62829 140 aaKnown RBP12.15□□□□□ -0.46
PTPN13-203ENST00000427191 VWC2LB2RUY7 222 aa12.15□□□□□ -0.46
PTPN13-203ENST00000427191 RPL39P5Q59GN2 51 aa12.15□□□□□ -0.46
PTPN13-203ENST00000427191 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
PTPN13-203ENST00000427191 EPDR1Q9UM22 224 aa12.15□□□□□ -0.46
PTPN13-203ENST00000427191 TFF3Q07654 80 aa12.15□□□□□ -0.47
PTPN13-203ENST00000427191 MPZP25189 248 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 HOXD3P31249 432 aaPredicted RBP12.14□□□□□ -0.47
PTPN13-203ENST00000427191 RNF125Q96EQ8 232 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 CFHR5Q9BXR6 569 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 A0A1B0GW64 132 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 CENPVL1A0A0U1RR11 272 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 SAA1P0DJI8 122 aaPredicted RBP12.14□□□□□ -0.47
PTPN13-203ENST00000427191 A0A1W2PQF6 199 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 FAM168AQ92567 244 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 DMRTA2Q96SC8 542 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 IGKV3-20P01619 116 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 MESP2Q0VG99 397 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 LINC01590Q5TEZ4 76 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 ZNF525Q8N782 197 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 IFI27L1Q96BM0 104 aa12.14□□□□□ -0.47
PTPN13-203ENST00000427191 C12orf77C9JDV5 145 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 LEPROTO15243 131 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 C1QTNF9P0C862 333 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 C19orf48Q6RUI8 117 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 FAM19A2Q8N3H0 131 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 C18orf12Q96KH6 178 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 KLF12Q9Y4X4 402 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 FAM89BQ8N5H3 189 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 TRAV2A0A0B4J234 112 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 VDAC2P45880 294 aaPredicted RBP12.13□□□□□ -0.47
PTPN13-203ENST00000427191 AMELYQ99218 206 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 CHAC1Q9BUX1 264 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 SRXN1Q9BYN0 137 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 PIN1P1O15428 100 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 ZNHIT1O43257 154 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 IGKV1D-42A0A075B6H8 117 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 IQCF6A8MYZ5 107 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 DOCK10Q96BY6 2186 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 H3BTX0 84 aa12.13□□□□□ -0.47
PTPN13-203ENST00000427191 ADMP35318 185 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 TNFSF13O75888 250 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 FOXL1Q12952 345 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 SBF2Q86WG5 1849 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 HEATR5AQ86XA9 2040 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 TRAV1-1A0A0B4J248 108 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 COL5A3P25940 1745 aaPredicted RBP12.12□□□□□ -0.47
PTPN13-203ENST00000427191 KLF4O43474 513 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 SDK2Q58EX2 2172 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 C8orf46Q8TAG6 207 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 LEAP2Q969E1 77 aa12.12□□□□□ -0.47
PTPN13-203ENST00000427191 INAFM2P0DMQ5 153 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
PTPN13-203ENST00000427191 SLC25A39Q9BZJ4 359 aaPredicted RBP12.11□□□□□ -0.47
PTPN13-203ENST00000427191 SCN10AQ9Y5Y9 1956 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 F8VVB4 439 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 F8VWA3 439 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 H3BMM0 161 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 SMIM10L1P0DMW3 83 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 RASL10AQ92737 203 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 ST6GALNAC6Q969X2 333 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 SMIM10Q96HG1 83 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 TRBV6-7A0A0A0MS04 114 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 TRAV14DV4A0A0A6YYC5 116 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 PRSS22Q9GZN4 317 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 OR13A1Q8NGR1 328 aa12.11□□□□□ -0.47
PTPN13-203ENST00000427191 SNAI2O43623 268 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 ESDP10768 282 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 CLEC19AQ6UXS0 136 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 MIR17HGQ75NE6 70 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 SLC22A18ASQ8N1D0 253 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 ZNRF1Q8ND25 227 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 OR10W1Q8NGF6 305 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 LY96Q9Y6Y9 160 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
PTPN13-203ENST00000427191 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
PTPN13-203ENST00000427191 REPIN1Q9BWE0 567 aaKnown RBP12.1□□□□□ -0.47
PTPN13-203ENST00000427191 LAMTOR3Q9UHA4 124 aa12.1□□□□□ -0.47
PTPN13-203ENST00000427191 LILRA1O75019 489 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms