RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 FAM27E3Q08E93 113 aa10.52□□□□□ -0.72
HDLBP-214ENST00000427183 DOCK3Q8IZD9 2030 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 APC2O95996 2303 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 PRR19A6NJB7 356 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 ZNF124Q15973 351 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 ZXDCQ2QGD7 858 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-214ENST00000427183 Q6AWC8 147 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 C1orf162Q8NEQ5 155 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-214ENST00000427183 ZNF703Q9H7S9 590 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-214ENST00000427183 SPTBP11277 2137 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 A0A1B0GW15 77 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 UCNP55089 124 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 MESP2Q0VG99 397 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 TMEM167AQ8TBQ9 72 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 CITED1Q99966 193 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 INS-IGF2F8WCM5 200 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 INSP01308 110 aa10.52□□□□□ -0.73
HDLBP-214ENST00000427183 OSR1Q8TAX0 266 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-214ENST00000427183 RTBDNQ9BSG5 229 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-214ENST00000427183 NAPSAO96009 420 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 OR9G4Q8NGQ1 327 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 HS3ST3B1Q9Y662 390 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 TFF1P04155 84 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 B9A039 149 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 ZNF525Q8N782 197 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 SCRT1Q9BWW7 348 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 OTORQ9NRC9 128 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 HEATR5BQ9P2D3 2071 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 A0A087WWC5 75 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 C4orf51C9J302 202 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 ATP5L2Q7Z4Y8 100 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 CFHR5Q9BXR6 569 aa10.51□□□□□ -0.73
HDLBP-214ENST00000427183 SCN8AQ9UQD0 1980 aa10.5□□□□□ -0.73
HDLBP-214ENST00000427183 NCR2O95944 276 aa10.5□□□□□ -0.73
HDLBP-214ENST00000427183 LGALS1P09382 135 aaKnown RBP10.5□□□□□ -0.73
HDLBP-214ENST00000427183 GP6Q9HCN6 339 aa10.5□□□□□ -0.73
HDLBP-214ENST00000427183 PILRAQ9UKJ1 303 aa10.5□□□□□ -0.73
HDLBP-214ENST00000427183 NYNRINQ9P2P1 1898 aaKnown RBP10.5□□□□□ -0.73
HDLBP-214ENST00000427183 APOBEC3AP31941 199 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-214ENST00000427183 IFI27L1Q96BM0 104 aa10.5□□□□□ -0.73
HDLBP-214ENST00000427183 C7orf69Q9H7B7 122 aa10.5□□□□□ -0.73
HDLBP-214ENST00000427183 CABIN1Q9Y6J0 2220 aa10.5□□□□□ -0.73
HDLBP-214ENST00000427183 LINC01590Q5TEZ4 76 aa10.5□□□□□ -0.73
HDLBP-214ENST00000427183 COX6A1P12074 109 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 TMEM54Q969K7 222 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 CEACAM1P13688 526 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 CCL3L1P16619 93 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 SSBP2P81877 361 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-214ENST00000427183 TPTE2P1Q5T6R2 138 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 COLCA1Q6ZS62 124 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 EP400Q96L91 3159 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 TMEM8BA6NDV4 472 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 A8MXK9 166 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BKO60814 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BJP06899 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BOP23527 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BBP33778 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BDP58876 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BCP62807 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST2H2BEQ16778 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-214ENST00000427183 LCNL1Q6ZST4 164 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 GTF3AQ92664 365 aaKnown RBP10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BHQ93079 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BNQ99877 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 HIST1H2BMQ99879 126 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 ASCL2Q99929 193 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 PATJQ8NI35 1801 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 CELA3AP09093 270 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 ESDP10768 282 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 ATP5IP56385 69 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-214ENST00000427183 OCC1Q8TAD7 63 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 MRAPQ8TCY5 172 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 PEMTQ9UBM1 199 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 CKAP5Q14008 2032 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 SVILO95425 2214 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 TRAV8-3A0A0A6YYJ7 113 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 SHISA3A0PJX4 238 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 RNF222A6NCQ9 220 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 VWC2LB2RUY7 222 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 UMODP07911 640 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-214ENST00000427183 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 PSG8Q9UQ74 426 aa10.49□□□□□ -0.73
HDLBP-214ENST00000427183 ERVK11-1P61568 191 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 HSD52Q0P140 79 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 COX5BP10606 129 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
HDLBP-214ENST00000427183 CCL20P78556 96 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 FHL5Q5TD97 284 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 LINC00527Q9UJ94 153 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 TSC2P49815 1807 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 KBTBD11-OT1A0A1B0GTJ5 212 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 RFPL3SP0C7P2 107 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 NSUN5P1Q3KNT7 163 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 SLC25A45Q8N413 288 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 TRAV9-1A0A075B6T8 112 aa10.48□□□□□ -0.73
HDLBP-214ENST00000427183 HOXB1P14653 301 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-214ENST00000427183 TMEM30BQ3MIR4 351 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms