RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ARHGAP32A7KAX9 2087 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 A0A1B0GWJ7 208 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 A0A1W2PN81 502 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 OR5G3P0C626 314 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 RAB4AP20338 218 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 SLAQ13239 276 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 TIMM23BQ5SRD1 257 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 WFDC8Q8IUA0 241 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 SLC25A33Q9BSK2 321 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 RPUSD1Q9UJJ7 312 aaKnown RBP11.66□□□□□ -0.54
ERCC3-202ENST00000426778 CORTO00230 105 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 CFHR2P36980 270 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 HCP5Q6MZN7 132 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 CCL17Q92583 94 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 NRN1Q9NPD7 142 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 TMEM167BQ9NRX6 74 aa11.66□□□□□ -0.54
ERCC3-202ENST00000426778 DIRC3C9JPN6 131 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 BMPR1BO00238 502 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 TOX4O94842 621 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 CAMPP49913 170 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 CX3CL1P78423 397 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 WT1-ASQ06250 92 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 LBHQ53QV2 105 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-202ENST00000426778 LCN12Q6JVE5 192 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 ZNF788Q6ZQV5 615 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 SLC25A48Q6ZT89 311 aaKnown RBP11.65□□□□□ -0.54
ERCC3-202ENST00000426778 MBD3L4A6NDZ8 208 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-202ENST00000426778 MBD3L3A6NE82 208 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-202ENST00000426778 MBD3L5A6NJ08 208 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-202ENST00000426778 GPX1P07203 203 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 C8orf88P0DMB2 117 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 RANP62826 216 aaKnown RBP11.65□□□□□ -0.54
ERCC3-202ENST00000426778 CD69Q07108 199 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 LYPD2Q6UXB3 125 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 MBD3L2Q8NHZ7 208 aaPredicted RBP11.65□□□□□ -0.54
ERCC3-202ENST00000426778 SFXN3Q9BWM7 321 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 CDC42EP3Q9UKI2 254 aa11.65□□□□□ -0.54
ERCC3-202ENST00000426778 IGLV3-9A0A075B6K5 115 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 A0A1W2PS18 150 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 ORM2P19652 201 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 IGFL2Q6UWQ7 119 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 GSX1Q9H4S2 264 aaPredicted RBP11.64□□□□□ -0.55
ERCC3-202ENST00000426778 SLC25A10Q9UBX3 287 aaPredicted RBP11.64□□□□□ -0.55
ERCC3-202ENST00000426778 ISLRO14498 428 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 TEX43Q6ZNM6 134 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 ZADH2Q8N4Q0 377 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 FAM167A-AS1Q96KT0 104 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 TUBG2Q9NRH3 451 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 WNK2Q9Y3S1 2297 aa11.64□□□□□ -0.55
ERCC3-202ENST00000426778 ENSAO43768 121 aaKnown RBP11.63□□□□□ -0.55
ERCC3-202ENST00000426778 USF1P22415 310 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-202ENST00000426778 CD40P25942 277 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 SELENOVP59797 346 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 RPL8P62917 257 aaKnown RBP11.63□□□□□ -0.55
ERCC3-202ENST00000426778 LOXL4Q96JB6 756 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 SLC35E1Q96K37 410 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 TMEM68Q96MH6 324 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 AKAP6Q13023 2319 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 SLC25A17O43808 307 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 COX7A2P2O60397 106 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 NPSP0C0P6 89 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 BRS3P32247 399 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 MFAP2P55001 183 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 PATE2Q6UY27 113 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 OR10X1Q8NGY0 326 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 CORO2AQ92828 525 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 IGF2BP2-AS1Q96M15 143 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 ASCL2Q99929 193 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 GNB1LQ9BYB4 327 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 TP73-AS1Q9UF72 201 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 Q71RC1 249 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-202ENST00000426778 FAM222BQ8WU58 562 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 ADTRPQ96IZ2 230 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 SAP30LQ9HAJ7 183 aa11.63□□□□□ -0.55
ERCC3-202ENST00000426778 AMMECR1Q9Y4X0 333 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-202ENST00000426778 CGB1A6NKQ9 187 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 H0YJW9 148 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 M0QZ24 198 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 MMDQ15546 238 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 C2orf83Q53S99 150 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 Q8N976 141 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-202ENST00000426778 IGFBPL1Q8WX77 278 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 DNAJC4Q9NNZ3 241 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 ATRXP46100 2492 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 MAP1AP78559 2803 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-202ENST00000426778 hADV38S2A0JD32 116 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 PPOXP50336 477 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 TAS2R45P59539 299 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 PMCHL1Q16048 86 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 Q6ZVH6 145 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 FLYWCH2Q96CP2 140 aaKnown RBP11.62□□□□□ -0.55
ERCC3-202ENST00000426778 MIEN1Q9BRT3 115 aa11.62□□□□□ -0.55
ERCC3-202ENST00000426778 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms