RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 EIF5AP63241 154 aaKnown RBP7.89□□□□□ -1.15
CD44-207ENST00000425428 AWAT1Q58HT5 328 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 ZNF709Q8N972 641 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 OR5C1Q8NGR4 320 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 PPP1R14BQ96C90 147 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 ACY3Q96HD9 319 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 AQP10Q96PS8 301 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 TMEM147Q9BVK8 224 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 GNB4Q9HAV0 340 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 UQCC1Q9NVA1 299 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 TNFSF18Q9UNG2 199 aa7.89□□□□□ -1.15
CD44-207ENST00000425428 ZFP92A6NM28 416 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 H0YIZ8 118 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 HNRNPCP07910 306 aaKnown RBP eCLIP7.88□□□□□ -1.15
CD44-207ENST00000425428 S100A7P31151 101 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 PROK1P58294 105 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 ZNF345Q14585 488 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 SPSB3Q6PJ21 355 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 S100A7AQ86SG5 101 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 PRIMA1Q86XR5 153 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 SCARB1Q8WTV0 552 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 DPF1Q92782 380 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 FANCD2OSQ96PS1 177 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 KCNIP2Q9NS61 270 aa7.88□□□□□ -1.15
CD44-207ENST00000425428 IGHV3-21A0A0B4J1V1 117 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 IGSF23A1L1A6 192 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 C17orf112F2Z3M2 114 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 SOX15O60248 233 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 MPDU1O75352 247 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 NDUFB8O95169 186 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 TMEM50AO95807 157 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 RPLP1P05386 114 aaKnown RBP7.87□□□□□ -1.15
CD44-207ENST00000425428 CDX1P47902 265 aaPredicted RBP7.87□□□□□ -1.15
CD44-207ENST00000425428 NHLH2Q02577 135 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 RELQ04864 619 aaPredicted RBP7.87□□□□□ -1.15
CD44-207ENST00000425428 KRTAP24-1Q3LI83 254 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 TEPPQ6URK8 271 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 ZNF491Q8N8L2 437 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 RNF152Q8N8N0 203 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 TAF15Q92804 592 aaKnown RBP eCLIP7.87□□□□□ -1.15
CD44-207ENST00000425428 BSCL2Q96G97 398 aaPredicted RBP7.87□□□□□ -1.15
CD44-207ENST00000425428 ATP5SQ99766 215 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 NEURL2Q9BR09 285 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 I3L2K1 104 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 IGHV3-11P01762 117 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 RND2P52198 227 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 CLINT1Q14677 625 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 KLK9Q2XQG4 91 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 Q5BKY6 102 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 PVRIGQ6DKI7 326 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 CLEC19AQ6UXS0 136 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 C11orf44Q8N8P7 122 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 KLHL30-AS1Q8NEE0 82 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 OR4X1Q8NH49 305 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 ARPC5LQ9BPX5 153 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 ARL6Q9H0F7 186 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 KLK15Q9H2R5 256 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 C11orf1Q9H5F2 150 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 PEF1Q9UBV8 284 aaKnown RBP7.87□□□□□ -1.15
CD44-207ENST00000425428 PFDN2Q9UHV9 154 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 KLK9Q9UKQ9 250 aa7.87□□□□□ -1.15
CD44-207ENST00000425428 SETD2Q9BYW2 2564 aaPredicted RBP7.86□□□□□ -1.15
CD44-207ENST00000425428 NF1P21359 2839 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 UBE2L5PA0A1B0GUS4 154 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 ANKRD34BA5PLL1 514 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 K7EIM0 57 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 CLN5O75503 358 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 JTBO76095 146 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 CFDP00746 253 aaPredicted RBP7.86□□□□□ -1.15
CD44-207ENST00000425428 CLEC3BP05452 202 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 LGALS1P09382 135 aaKnown RBP7.86□□□□□ -1.15
CD44-207ENST00000425428 CD28P10747 220 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 ZP3P21754 424 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 OR10J1P30954 320 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 FCGR2BP31994 310 aaPredicted RBP7.86□□□□□ -1.15
CD44-207ENST00000425428 ARL3P36405 182 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 EIF2B2P49770 351 aaKnown RBP7.86□□□□□ -1.15
CD44-207ENST00000425428 MFAP2P55001 183 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 C19orf35Q6ZS72 473 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 TMEM144Q7Z5S9 345 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 NDUFA11Q86Y39 141 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 TMEM116Q8NCL8 245 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 C4orf3Q8WVX3 66 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 NPIPB3Q92617 1050 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 SMIM3Q9BZL3 60 aa7.86□□□□□ -1.15
CD44-207ENST00000425428 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.85□□□□□ -1.15
CD44-207ENST00000425428 A0A1W2PRX2 142 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 OR2T8A6NH00 312 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 GGCTO75223 188 aaKnown RBP7.85□□□□□ -1.15
CD44-207ENST00000425428 IGHV3-23P01764 117 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 HSPB1P04792 205 aaKnown RBP7.85□□□□□ -1.15
CD44-207ENST00000425428 GPR183P32249 361 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 SELENOTP62341 195 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 GAMTQ14353 236 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 RPEL1Q2QD12 228 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 FAM106AQ4KMX7 169 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 ZNF343Q6P1L6 599 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 C10orf99Q6UWK7 81 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 LCNL1Q6ZST4 164 aa7.85□□□□□ -1.15
CD44-207ENST00000425428 OR4F17Q8NGA8 305 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms