RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC00339-203ENST00000420503 FAM25AB3EWG3 89 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 FAM25CB3EWG5 89 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 FAM25GB3EWG6 89 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 DNASE2O00115 360 aaPredicted RBP9.28□□□□□ -0.92
LINC00339-203ENST00000420503 RGS5O15539 181 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 GNG7O60262 68 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 ZNF688P0C7X2 276 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 NAT1P18440 290 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 PRSS3P35030 304 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 MLANAQ16655 118 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 C12orf74Q32Q52 190 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 DHRS11Q6UWP2 260 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 STXBP6Q8NFX7 210 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 MRGPRFQ96AM1 343 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 SEC22AQ96IW7 307 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 TMEM56Q96MV1 263 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 ABHD1Q96SE0 405 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 IFT46Q9NQC8 304 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 NDUFA13Q9P0J0 144 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 EXTL2Q9UBQ6 330 aa9.28□□□□□ -0.92
LINC00339-203ENST00000420503 TRAV10A0A0B4J240 114 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 PRSS29PA6NIE9 313 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 K7EQG2 157 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 GPR31O00270 319 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 TCTAP57738 103 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 PRCDQ00LT1 54 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 GSG1LQ6UXU4 331 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 SNX29P2Q8IUI4 249 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 LYSMD2Q8IV50 215 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 STHQ8IWL8 128 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 MCFD2Q8NI22 146 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 HRH4Q9H3N8 390 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 SCPEP1Q9HB40 452 aa9.27□□□□□ -0.93
LINC00339-203ENST00000420503 ZNF705EA8MWA4 302 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-203ENST00000420503 C11orf94C9JXX5 98 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 HLA-DMAP28067 261 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 HRH1P35367 487 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-203ENST00000420503 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 TBC1D26Q86UD7 250 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 ZNF114Q8NC26 417 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 OR5H2Q8NGV7 314 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 TXN2Q99757 166 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 SOSTQ9BQB4 213 aa9.26□□□□□ -0.93
LINC00339-203ENST00000420503 FNDC4Q9H6D8 234 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-203ENST00000420503 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 TMEM50AO95807 157 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 TNFSF8P32971 234 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 DEFB1P60022 68 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 PAFAH1B2P68402 229 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 ZNF600Q6ZNG1 722 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 DCANP1Q8TF63 244 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 DIRAS2Q96HU8 199 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 KLK11Q9UBX7 282 aa9.25□□□□□ -0.93
LINC00339-203ENST00000420503 DEFB131BA0A096LNP1 70 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 A6NHS1 94 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 CTDSPLO15194 276 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 IGKV1-5P01602 117 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 MIFP14174 115 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 PI3P19957 117 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 P2RY1P47900 373 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 HSPE1P61604 102 aaKnown RBP9.24□□□□□ -0.93
LINC00339-203ENST00000420503 PVRIGQ6DKI7 326 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 H2BFWTQ7Z2G1 175 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 CADM3Q8N126 398 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 POM121L12Q8N7R1 296 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 OR52I2Q8NH67 350 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 OR4A16Q8NH70 328 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 C15orf40Q8WUR7 153 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 RNF126Q9BV68 326 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 FKBP11Q9NYL4 201 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 MTFP1Q9UDX5 166 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 TBC1D24Q9ULP9 559 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 NACAE9PAV3 2078 aa9.24□□□□□ -0.93
LINC00339-203ENST00000420503 TRAV2A0A0B4J234 112 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 A0A0B4J293 547 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 A0A0G2JRQ6 117 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 GABARAPH6UMI1 98 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 AMBPP02760 352 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 RNASE2P10153 161 aaKnown RBP9.23□□□□□ -0.93
LINC00339-203ENST00000420503 RCVRNP35243 200 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 TAS2R46P59540 309 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 MRPS10P82664 201 aaKnown RBP9.23□□□□□ -0.93
LINC00339-203ENST00000420503 TIGITQ495A1 244 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 CCDC190Q86UF4 302 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 CMTM1Q8IZ96 169 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 DUSP18Q8NEJ0 188 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 SMIM4Q8WVI0 70 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 TSC22D3Q99576 134 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 RABL2AQ9UBK7 228 aaPredicted RBP9.23□□□□□ -0.93
LINC00339-203ENST00000420503 RABL2BQ9UNT1 228 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 V9GYH0 126 aa9.23□□□□□ -0.93
LINC00339-203ENST00000420503 IGKV1-17P01599 117 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms