RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 LYG2Q86SG7 212 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 DIRAS2Q96HU8 199 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 NARS2Q96I59 477 aaKnown RBP15.8■□□□□ 0.12
PTPN4-202ENST00000420482 PRRT1Q99946 306 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 MIXL1Q9H2W2 232 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 MAP6D1Q9H9H5 199 aa15.8■□□□□ 0.12
PTPN4-202ENST00000420482 PUS1Q9Y606 427 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTPN4-202ENST00000420482 A0A0J9YWU9 116 aa15.79■□□□□ 0.12
PTPN4-202ENST00000420482 RPS10-NUDT3A0A1W2PQS6 291 aa15.79■□□□□ 0.12
PTPN4-202ENST00000420482 CTDSP2O14595 271 aa15.79■□□□□ 0.12
PTPN4-202ENST00000420482 NOL3O60936 208 aaKnown RBP15.79■□□□□ 0.12
PTPN4-202ENST00000420482 CDS2O95674 445 aa15.79■□□□□ 0.12
PTPN4-202ENST00000420482 TMEM50AO95807 157 aa15.79■□□□□ 0.12
PTPN4-202ENST00000420482 RNASE2P10153 161 aaKnown RBP15.79■□□□□ 0.12
PTPN4-202ENST00000420482 HTR2BP41595 481 aa15.79■□□□□ 0.12
PTPN4-202ENST00000420482 RPL11P62913 178 aaKnown RBP15.79■□□□□ 0.12
PTPN4-202ENST00000420482 CLVS1Q8IUQ0 354 aaPredicted RBP15.79■□□□□ 0.12
PTPN4-202ENST00000420482 APRG1Q8IVJ8 170 aa15.79■□□□□ 0.12
PTPN4-202ENST00000420482 RBPMSQ93062 196 aaKnown RBP15.79■□□□□ 0.12
PTPN4-202ENST00000420482 BCL7BQ9BQE9 202 aa15.79■□□□□ 0.12
PTPN4-202ENST00000420482 IGHV3OR16-13A0A075B7E8 117 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 TRAV30A0A087WSZ9 112 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 IGHV3-74A0A0B4J1X5 117 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 NUPR2A6NF83 97 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 CTDSPLO15194 276 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 OR5AC1P0C628 307 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 ATF4P18848 351 aaPredicted RBP15.78■□□□□ 0.12
PTPN4-202ENST00000420482 NPPCP23582 126 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 RPL5P46777 297 aaKnown RBP15.78■□□□□ 0.12
PTPN4-202ENST00000420482 SPCS2Q15005 226 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 PLECQ15149 4684 aaKnown RBP15.78■□□□□ 0.12
PTPN4-202ENST00000420482 FAM90A2PQ658T7 463 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 PVRIGQ6DKI7 326 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 GBGT1Q8N5D6 347 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 OR52E5Q8NH55 327 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 CSTL1Q9H114 145 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 VSIRQ9H7M9 311 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 NAA60Q9H7X0 242 aa15.78■□□□□ 0.12
PTPN4-202ENST00000420482 MPTX1A8MV57 137 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 CLN5O75503 358 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 DFFBO76075 338 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 OR4X1Q8NH49 305 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 GATAD1Q8WUU5 269 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 TMEM230Q96A57 120 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 ZNF414Q96IQ9 312 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 SCGB3A2Q96PL1 93 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 METTL26Q96S19 204 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 HEYLQ9NQ87 328 aaPredicted RBP15.77■□□□□ 0.12
PTPN4-202ENST00000420482 CCDC59Q9P031 241 aaKnown RBP15.77■□□□□ 0.12
PTPN4-202ENST00000420482 KCNIP3Q9Y2W7 256 aa15.77■□□□□ 0.12
PTPN4-202ENST00000420482 ALMS1Q8TCU4 4167 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 TRAV2A0A0B4J234 112 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 TMBIM6P55061 237 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 PMS2P11Q13670 270 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 FAAP20Q6NZ36 180 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 GLYATL2Q8WU03 294 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 ST8SIA2Q92186 375 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 RTBDNQ9BSG5 229 aaPredicted RBP15.76■□□□□ 0.11
PTPN4-202ENST00000420482 ZFAND3Q9H8U3 227 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 RSL24D1Q9UHA3 163 aaKnown RBP15.76■□□□□ 0.11
PTPN4-202ENST00000420482 SCP2D1Q9UJQ7 156 aa15.76■□□□□ 0.11
PTPN4-202ENST00000420482 A0A0G2JRQ6 117 aa15.75■□□□□ 0.11
PTPN4-202ENST00000420482 EIF2B2P49770 351 aaKnown RBP15.75■□□□□ 0.11
PTPN4-202ENST00000420482 AARDQ4LEZ3 155 aa15.75■□□□□ 0.11
PTPN4-202ENST00000420482 TMEM268Q5VZI3 342 aa15.75■□□□□ 0.11
PTPN4-202ENST00000420482 NOXA1Q86UR1 476 aa15.75■□□□□ 0.11
PTPN4-202ENST00000420482 OR4C16Q8NGL9 310 aa15.75■□□□□ 0.11
PTPN4-202ENST00000420482 GRAMD2BQ96HH9 432 aa15.75■□□□□ 0.11
PTPN4-202ENST00000420482 MS4A6AQ9H2W1 248 aa15.75■□□□□ 0.11
PTPN4-202ENST00000420482 GPR132Q9UNW8 380 aa15.75■□□□□ 0.11
PTPN4-202ENST00000420482 CRYM-AS1A6NIL9 109 aa15.74■□□□□ 0.11
PTPN4-202ENST00000420482 CEBPZOSA8MTT3 80 aa15.74■□□□□ 0.11
PTPN4-202ENST00000420482 SLC25A4P12235 298 aa15.74■□□□□ 0.11
PTPN4-202ENST00000420482 BSXQ3C1V8 233 aa15.74■□□□□ 0.11
PTPN4-202ENST00000420482 CACNG5Q9UF02 275 aa15.74■□□□□ 0.11
PTPN4-202ENST00000420482 KLK5Q9Y337 293 aaPredicted RBP15.74■□□□□ 0.11
PTPN4-202ENST00000420482 PIGBOS1A0A0B4J2F0 54 aa15.73■□□□□ 0.11
PTPN4-202ENST00000420482 A0A1B0GU03 582 aa15.73■□□□□ 0.11
PTPN4-202ENST00000420482 ETFRF1Q6IPR1 90 aa15.73■□□□□ 0.11
PTPN4-202ENST00000420482 Q6ZRM9 215 aa15.73■□□□□ 0.11
PTPN4-202ENST00000420482 SELENOHQ8IZQ5 122 aaKnown RBP15.73■□□□□ 0.11
PTPN4-202ENST00000420482 OR51S1Q8NGJ8 323 aa15.73■□□□□ 0.11
PTPN4-202ENST00000420482 DYNC2LI1Q8TCX1 351 aa15.73■□□□□ 0.11
PTPN4-202ENST00000420482 RNASEH2CQ8TDP1 164 aaKnown RBP15.73■□□□□ 0.11
PTPN4-202ENST00000420482 IL22RA2Q969J5 263 aa15.73■□□□□ 0.11
PTPN4-202ENST00000420482 FNDC4Q9H6D8 234 aaPredicted RBP15.73■□□□□ 0.11
PTPN4-202ENST00000420482 RABAC1Q9UI14 185 aa15.73■□□□□ 0.11
PTPN4-202ENST00000420482 IGHV3-66A0A0C4DH42 116 aa15.72■□□□□ 0.11
PTPN4-202ENST00000420482 GSTZ1O43708 216 aaPredicted RBP15.72■□□□□ 0.11
PTPN4-202ENST00000420482 APOHP02749 345 aaPredicted RBP15.72■□□□□ 0.11
PTPN4-202ENST00000420482 C2orf83Q53S99 150 aa15.72■□□□□ 0.11
PTPN4-202ENST00000420482 SLC24A4Q8NFF2 622 aa15.72■□□□□ 0.11
PTPN4-202ENST00000420482 RARRES2Q99969 163 aa15.72■□□□□ 0.11
PTPN4-202ENST00000420482 TMEM56-RWDD3S4R434 201 aa15.72■□□□□ 0.11
PTPN4-202ENST00000420482 ANKRD20A5PA0PJZ0 165 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 SULT1A3P0DMM9 295 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 SULT1A4P0DMN0 295 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 CRYBB3P26998 211 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 ZNF124Q15973 351 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 CEMP1Q6PRD7 247 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms