RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 RBKSQ9H477 322 aa7.35□□□□□ -1.23
CHRNA1-206ENST00000416004 TPSG1Q9NRR2 321 aa7.35□□□□□ -1.23
CHRNA1-206ENST00000416004 STRAPQ9Y3F4 350 aaKnown RBP7.35□□□□□ -1.23
CHRNA1-206ENST00000416004 RNF114Q9Y508 228 aa7.35□□□□□ -1.23
CHRNA1-206ENST00000416004 MINOS1-NBL1R4GNA1 71 aa7.35□□□□□ -1.23
CHRNA1-206ENST00000416004 IGSF23A1L1A6 192 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 FAM24AA6NFZ4 105 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 C15orf61A6NNL5 157 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 UPK2O00526 184 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 SYNGR2O43760 224 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BKO60814 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BJP06899 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BOP23527 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 RPL12P30050 165 aaKnown RBP7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BBP33778 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 P2RY1P47900 373 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BDP58876 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 UBE2KP61086 200 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BCP62807 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 DLK1P80370 383 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 GUK1Q16774 197 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HAGHQ16775 308 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST2H2BEQ16778 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 MRGPRG-AS1Q2M3A8 158 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 SAPCD1Q5SSQ6 148 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 OR4A16Q8NH70 328 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BHQ93079 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 PACRGQ96M98 296 aaPredicted RBP7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BNQ99877 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 HIST1H2BMQ99879 126 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 SCRT1Q9BWW7 348 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 GOLT1BQ9Y3E0 138 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 FAM90A26D6RGX4 464 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 M0R143 59 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 DLEU1O43261 78 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 SLC25A17O43808 307 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 GCGP01275 180 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 AKR1C8PQ5T2L2 129 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 OR2T6Q8NHC8 308 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 RCC1LQ96I51 464 aaKnown RBP7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 NPFFR1Q9GZQ6 430 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 TMEM14BQ9NUH8 114 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 BET1LQ9NYM9 111 aa7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 FOXA2Q9Y261 457 aaPredicted RBP7.34□□□□□ -1.23
CHRNA1-206ENST00000416004 M0QZ24 198 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 KBTBD11O94819 623 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 OPN1MWP04001 364 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 CRYGBP07316 175 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 SEC11BP0C7V7 166 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 OPN1MW2P0DN77 364 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 OPN1MW3P0DN78 364 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 BRS3P32247 399 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 VAMP2P63027 116 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 PSG5Q15238 335 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 LY6EQ16553 131 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 ZNF674Q2M3X9 581 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 OR2C3Q8N628 320 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 RAB40CQ96S21 281 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 ARV1Q9H2C2 271 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 PRO1933Q9H354 126 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 LYRM2Q9NU23 88 aaPredicted RBP7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 TCF19Q9Y242 345 aa7.33□□□□□ -1.24
CHRNA1-206ENST00000416004 OOSP1A8MZH6 123 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 CD1BP29016 333 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 LGALS7P47929 136 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 EWSR1Q01844 656 aaKnown RBP eCLIP7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 TMEM267Q0VDI3 215 aaPredicted RBP7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 PDLIM3Q53GG5 364 aaPredicted RBP7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 C10orf55Q5SWW7 151 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 CCDC144NLQ6NUI1 221 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 ZNF429Q86V71 674 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 TMEM252Q8N6L7 170 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 TMEM167AQ8TBQ9 72 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 DTD1Q8TEA8 209 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 EAF1Q96JC9 268 aaPredicted RBP7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 OR4C12Q96R67 309 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 SMIM3Q9BZL3 60 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 ZNF430Q9H8G1 570 aaPredicted RBP7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 WFDC1Q9HC57 220 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 PSENENQ9NZ42 101 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 FBXL17Q9UF56 701 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 OR51B2Q9Y5P1 312 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 TEX50A0A1B0GTY4 177 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 CEBPZOSA8MTT3 80 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 B4DEV8 164 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 E7EUB6 86 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 AGPAT2O15120 278 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 DFFBO76075 338 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 CST7O76096 145 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 FABP4P15090 132 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 VDAC2P45880 294 aaPredicted RBP7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 HSPE1P61604 102 aaKnown RBP7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 ARL16Q0P5N6 197 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 RPL7L1Q6DKI1 246 aaKnown RBP7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 HAPLN4Q86UW8 402 aa7.32□□□□□ -1.24
CHRNA1-206ENST00000416004 THNSL2Q86YJ6 484 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms