RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SDF2L1Q9HCN8 221 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 M0QZK8 103 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 GGCTO75223 188 aaKnown RBP12.44□□□□□ -0.42
SHMT2-202ENST00000414700 NXPH3O95157 252 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 P0C879 139 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 IL17RELQ6ZVW7 336 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 BCL6BQ8N143 479 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-202ENST00000414700 FLYWCH2Q96CP2 140 aaKnown RBP12.44□□□□□ -0.42
SHMT2-202ENST00000414700 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 PYGO2Q9BRQ0 406 aa12.44□□□□□ -0.42
SHMT2-202ENST00000414700 VENTXO95231 258 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 FSHBP01225 129 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 LINC00614P0C842 121 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 MDKP21741 143 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-202ENST00000414700 MC5RP33032 325 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 PCP4P48539 62 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 TMEM177Q53S58 311 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 FAM120AOSQ5T036 256 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 OR4C13Q8NGP0 309 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 TMEM18Q96B42 140 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 TMEM208Q9BTX3 173 aa12.43□□□□□ -0.42
SHMT2-202ENST00000414700 LYRM2Q9NU23 88 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-202ENST00000414700 TRAV3A0A0B4J244 114 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 DUXBA0A1W2PPF3 345 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 PPP5D1E7EU14 171 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 OR9G9P0C7N8 305 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 RPS16P62249 146 aaKnown RBP12.42□□□□□ -0.42
SHMT2-202ENST00000414700 TMEM252Q8N6L7 170 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 LSM10Q969L4 123 aaKnown RBP12.42□□□□□ -0.42
SHMT2-202ENST00000414700 GNG13Q9P2W3 67 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 CACNG5Q9UF02 275 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 KIR2DL5BA0A0G2JN68 375 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 KIR2DL5BA0A0G2JPC4 375 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 IGLV2-23P01705 113 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 RPLP1P05386 114 aaKnown RBP12.42□□□□□ -0.42
SHMT2-202ENST00000414700 SAA1P0DJI8 122 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-202ENST00000414700 BCL2P10415 239 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 NKX2-1P43699 371 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-202ENST00000414700 VAMP2P63027 116 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 BAXQ07812 192 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 C1orf194Q5T5A4 169 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 OR4A47Q6IF82 309 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 CCDC144NLQ6NUI1 221 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 KIR2DL5AQ8N109 375 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 OR5C1Q8NGR4 320 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 OSR1Q8TAX0 266 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-202ENST00000414700 TMEM140Q9NV12 185 aa12.42□□□□□ -0.42
SHMT2-202ENST00000414700 HIVEP2P31629 2446 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 OOSP1A8MZH6 123 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 CD5LO43866 347 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 SOX15O60248 233 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 DYNLT3P51808 116 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 TEX38Q6PEX7 206 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 H2BFWTQ7Z2G1 175 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 P2RX4Q99571 388 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 SPIN2AQ99865 258 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 SPIN2BQ9BPZ2 258 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 TPSG1Q9NRR2 321 aa12.41□□□□□ -0.42
SHMT2-202ENST00000414700 CD1BP29016 333 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 TAS2R30P59541 319 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 RUNX1Q01196 453 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 HES1Q14469 280 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 EAF1Q96JC9 268 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-202ENST00000414700 NF1P21359 2839 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 F8P00451 2351 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 SLC25A17O43808 307 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 SSSCA1O60232 199 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 HRASP01112 189 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 PFN1P07737 140 aaKnown RBP12.4□□□□□ -0.42
SHMT2-202ENST00000414700 PMS2P11Q13670 270 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 POU2AF1Q16633 256 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-202ENST00000414700 MRPL41Q8IXM3 137 aaKnown RBP12.4□□□□□ -0.42
SHMT2-202ENST00000414700 ATP5SQ99766 215 aa12.4□□□□□ -0.42
SHMT2-202ENST00000414700 NSD1Q96L73 2696 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-202ENST00000414700 MYOD1P15172 320 aa12.39□□□□□ -0.43
SHMT2-202ENST00000414700 ERVK-16P61578 105 aa12.39□□□□□ -0.43
SHMT2-202ENST00000414700 PIFOQ8TCI5 191 aa12.39□□□□□ -0.43
SHMT2-202ENST00000414700 YAE1D1Q9NRH1 226 aa12.39□□□□□ -0.43
SHMT2-202ENST00000414700 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-202ENST00000414700 DEFB112Q30KQ8 113 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 C16orf82Q7Z2V1 217 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 MEGF9Q9H1U4 602 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 ZFP92A6NM28 416 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 MOSP00540 346 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 IL6RP08887 468 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-202ENST00000414700 NPSP0C0P6 89 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 RELBQ01201 579 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 ACOT6Q3I5F7 207 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-202ENST00000414700 MAGT1Q9H0U3 335 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 NAT8Q9UHE5 227 aa12.38□□□□□ -0.43
SHMT2-202ENST00000414700 RBMXL2O75526 392 aaKnown RBP12.37□□□□□ -0.43
SHMT2-202ENST00000414700 CST7O76096 145 aa12.37□□□□□ -0.43
SHMT2-202ENST00000414700 MMDQ15546 238 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms