RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 NMSQ5H8A3 153 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 COX8CQ7Z4L0 72 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 DTX2Q86UW9 622 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 WDR31Q8NA23 367 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 CMTM2Q8TAZ6 248 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 PNRC2Q9NPJ4 139 aaKnown RBP7.7□□□□□ -1.18
SNHG3-201ENST00000413987 SLC39A9Q9NUM3 307 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 PXMP4Q9Y6I8 212 aa7.7□□□□□ -1.18
SNHG3-201ENST00000413987 GTF3C1Q12789 2109 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 FAM90A26D6RGX4 464 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 YPEL1O60688 119 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 LGALS7P47929 136 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 TCTAP57738 103 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 LY6DQ14210 128 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 GUSBP1Q15486 140 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 ZNF726P1Q15940 193 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 OR4A47Q6IF82 309 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 OR10G9Q8NGN4 311 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 YPEL2Q96QA6 119 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 MANBALQ9NQG1 85 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 KCNS2Q9ULS6 477 aa7.69□□□□□ -1.18
SNHG3-201ENST00000413987 TRAV39A0A0B4J263 110 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 TRAPPC2LH3BP13 241 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 RER1O15258 196 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 IGHG4P01861 327 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 GYPAP02724 150 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 ESDP10768 282 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 HBG1P69891 147 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 HBG2P69892 147 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 BATFQ16520 125 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 PRSS8Q16651 343 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 ZGRF1Q86YA3 2104 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 OR4B1Q8NGF8 309 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 OR4P4Q8NGL7 312 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 RPUSD4Q96CM3 377 aaKnown RBP7.68□□□□□ -1.18
SNHG3-201ENST00000413987 LYZL4Q96KX0 146 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 PARLQ9H300 379 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 SIGLEC9Q9Y336 463 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 MMP23AO75900 390 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 PATE4P0C8F1 98 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 GUCA1AP43080 201 aaPredicted RBP7.68□□□□□ -1.18
SNHG3-201ENST00000413987 DLX6P56179 175 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 PPP1CBP62140 327 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 TPTE2P1Q5T6R2 138 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 DUX4L9Q6RFH8 374 aaPredicted RBP7.68□□□□□ -1.18
SNHG3-201ENST00000413987 AAED1Q7RTV5 226 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 OR4S2Q8NH73 311 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 MRPL30Q8TCC3 161 aaKnown RBP7.68□□□□□ -1.18
SNHG3-201ENST00000413987 SSBP4Q9BWG4 385 aaPredicted RBP7.68□□□□□ -1.18
SNHG3-201ENST00000413987 WIPI2Q9Y4P8 454 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 TIMM9Q9Y5J7 89 aa7.68□□□□□ -1.18
SNHG3-201ENST00000413987 PCNX1Q96RV3 2341 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 IL3RAP26951 378 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 HILS1P60008 231 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 SRSF7Q16629 238 aaKnown RBP eCLIP7.67□□□□□ -1.18
SNHG3-201ENST00000413987 HIST3H3Q16695 136 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 FAM19A5Q7Z5A7 132 aaPredicted RBP7.67□□□□□ -1.18
SNHG3-201ENST00000413987 CIB3Q96Q77 187 aaPredicted RBP7.67□□□□□ -1.18
SNHG3-201ENST00000413987 ENY2Q9NPA8 101 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 NCOA6Q14686 2063 aaPredicted RBP7.67□□□□□ -1.18
SNHG3-201ENST00000413987 LOC102725191A0A1B0GVB3 256 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 YPEL3P61236 119 aaPredicted RBP7.67□□□□□ -1.18
SNHG3-201ENST00000413987 CD164Q04900 197 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 FOXF2Q12947 444 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 Q6ZS49 121 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 OSR2Q8N2R0 312 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 ZNF525Q8N782 197 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 C9orf106Q8NAJ2 232 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 DYRK2Q92630 601 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 VSIRQ9H7M9 311 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 SLC7A10Q9NS82 523 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 ELOVL5Q9NYP7 299 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 PSG8Q9UQ74 426 aa7.67□□□□□ -1.18
SNHG3-201ENST00000413987 PDCD6O75340 191 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 MRPL33O75394 65 aaKnown RBP7.66□□□□□ -1.18
SNHG3-201ENST00000413987 CLEC12BQ2HXU8 276 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 C20orf196Q8IYI0 205 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 CNEP1R1Q8N9A8 125 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 TMEM54Q969K7 222 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 UQCR10Q9UDW1 63 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 TP53TG1Q9Y2A0 90 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 PAM16Q9Y3D7 125 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 CACNA1BQ00975 2339 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 PRR14LQ5THK1 2151 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 TRAV9-1A0A075B6T8 112 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 ZNF816-ZNF321PA0A0X1KG74 233 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 SYNGR1O43759 233 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 HTR1DP28221 377 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 CEACAM16Q2WEN9 425 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 Q6ZWC4 215 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 KLHDC1Q8N7A1 406 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 OR4F5Q8NH21 305 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 FGFBP3Q8TAT2 258 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 OR4F4Q96R69 305 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 WDR61Q9GZS3 305 aaKnown RBP7.66□□□□□ -1.18
SNHG3-201ENST00000413987 PPDPFQ9H3Y8 114 aa7.66□□□□□ -1.18
SNHG3-201ENST00000413987 TAAR3PQ9P1P4 343 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms