RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 APOHP02749 345 aaPredicted RBP16.47■□□□□ 0.23
MSH6-202ENST00000411819 RPL11P62913 178 aaKnown RBP16.47■□□□□ 0.23
MSH6-202ENST00000411819 SSBP1Q04837 148 aaKnown RBP16.47■□□□□ 0.23
MSH6-202ENST00000411819 FAM90A2PQ658T7 463 aa16.47■□□□□ 0.23
MSH6-202ENST00000411819 ZFAND3Q9H8U3 227 aa16.47■□□□□ 0.23
MSH6-202ENST00000411819 BIRC6Q9NR09 4857 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 NUPR2A6NF83 97 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 DISC1C4P0D8 188 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 DNASE2O00115 360 aaPredicted RBP16.46■□□□□ 0.23
MSH6-202ENST00000411819 SCGB2A1O75556 95 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 TMEM50AO95807 157 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 CD5P06127 495 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 IL18Q14116 193 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 SMIM4Q8WVI0 70 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 TMEM222Q9H0R3 208 aa16.46■□□□□ 0.23
MSH6-202ENST00000411819 A0A1B0GU03 582 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 DFFBO76075 338 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 ALDH3B2P48448 385 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 CLVS1Q8IUQ0 354 aaPredicted RBP16.45■□□□□ 0.22
MSH6-202ENST00000411819 FAM219AQ8IW50 185 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 TMEM217Q8N7C4 229 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 CSTL1Q9H114 145 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 FNDC4Q9H6D8 234 aaPredicted RBP16.45■□□□□ 0.22
MSH6-202ENST00000411819 TMEM231Q9H6L2 316 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 VSIRQ9H7M9 311 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 NAA60Q9H7X0 242 aa16.45■□□□□ 0.22
MSH6-202ENST00000411819 MRPL36Q9P0J6 103 aaKnown RBP16.45■□□□□ 0.22
MSH6-202ENST00000411819 MPTX1A8MV57 137 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 CLN5O75503 358 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 AKAIN1P0CW23 69 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 PVRIGQ6DKI7 326 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 Q6ZRM9 215 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 LILRB2Q8N423 598 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 OR4C16Q8NGL9 310 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 LHFPL5Q8TAF8 219 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 LINC00476Q8WZB0 136 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 RBPMSQ93062 196 aaKnown RBP16.44■□□□□ 0.22
MSH6-202ENST00000411819 DIRAS2Q96HU8 199 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 RTBDNQ9BSG5 229 aaPredicted RBP16.44■□□□□ 0.22
MSH6-202ENST00000411819 MS4A6AQ9H2W1 248 aa16.44■□□□□ 0.22
MSH6-202ENST00000411819 CDS2O95674 445 aa16.43■□□□□ 0.22
MSH6-202ENST00000411819 SPCS3P61009 180 aa16.43■□□□□ 0.22
MSH6-202ENST00000411819 SURF2Q15527 256 aaPredicted RBP16.43■□□□□ 0.22
MSH6-202ENST00000411819 GLYATL2Q8WU03 294 aa16.43■□□□□ 0.22
MSH6-202ENST00000411819 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.43■□□□□ 0.22
MSH6-202ENST00000411819 CACNG5Q9UF02 275 aa16.43■□□□□ 0.22
MSH6-202ENST00000411819 RABAC1Q9UI14 185 aa16.43■□□□□ 0.22
MSH6-202ENST00000411819 NPPCP23582 126 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 DEFB131AP59861 70 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 DHODHQ02127 395 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 MLANAQ16655 118 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 TMEM268Q5VZI3 342 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 LEMD1Q68G75 181 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 SELENOHQ8IZQ5 122 aaKnown RBP16.42■□□□□ 0.22
MSH6-202ENST00000411819 OR4X1Q8NH49 305 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 TMEM230Q96A57 120 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 METTL26Q96S19 204 aa16.42■□□□□ 0.22
MSH6-202ENST00000411819 HEYLQ9NQ87 328 aaPredicted RBP16.42■□□□□ 0.22
MSH6-202ENST00000411819 RPS10-NUDT3A0A1W2PQS6 291 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 A0A1W2PS18 150 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 LY6G6CO95867 125 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 HTR2BP41595 481 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 RPL5P46777 297 aaKnown RBP16.41■□□□□ 0.22
MSH6-202ENST00000411819 BSXQ3C1V8 233 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 CEMP1Q6PRD7 247 aaPredicted RBP16.41■□□□□ 0.22
MSH6-202ENST00000411819 OR52E5Q8NH55 327 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 RAB2BQ8WUD1 216 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 GATAD1Q8WUU5 269 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 PRRT1Q99946 306 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 RARRES2Q99969 163 aa16.41■□□□□ 0.22
MSH6-202ENST00000411819 CCDC59Q9P031 241 aaKnown RBP16.41■□□□□ 0.22
MSH6-202ENST00000411819 CRYM-AS1A6NIL9 109 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 CEBPZOSA8MTT3 80 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 CTDSPLO15194 276 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 NXPH3O95157 252 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 CA1P00915 261 aaPredicted RBP16.4■□□□□ 0.22
MSH6-202ENST00000411819 ATF4P18848 351 aaPredicted RBP16.4■□□□□ 0.22
MSH6-202ENST00000411819 TIGITQ495A1 244 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 FAM24BQ8N5W8 94 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 STXBP6Q8NFX7 210 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 OR51S1Q8NGJ8 323 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 NARS2Q96I59 477 aaKnown RBP16.4■□□□□ 0.22
MSH6-202ENST00000411819 GPR132Q9UNW8 380 aa16.4■□□□□ 0.22
MSH6-202ENST00000411819 KLK5Q9Y337 293 aaPredicted RBP16.4■□□□□ 0.22
MSH6-202ENST00000411819 AARDQ4LEZ3 155 aa16.39■□□□□ 0.21
MSH6-202ENST00000411819 SLC24A4Q8NFF2 622 aa16.39■□□□□ 0.21
MSH6-202ENST00000411819 DYNC2LI1Q8TCX1 351 aa16.39■□□□□ 0.21
MSH6-202ENST00000411819 GPR146Q96CH1 333 aa16.39■□□□□ 0.21
MSH6-202ENST00000411819 RABL2AQ9UBK7 228 aaPredicted RBP16.39■□□□□ 0.21
MSH6-202ENST00000411819 RABL2BQ9UNT1 228 aa16.39■□□□□ 0.21
MSH6-202ENST00000411819 TRAV30A0A087WSZ9 112 aa16.38■□□□□ 0.21
MSH6-202ENST00000411819 TRAV2A0A0B4J234 112 aa16.38■□□□□ 0.21
MSH6-202ENST00000411819 P2RY1P47900 373 aa16.38■□□□□ 0.21
MSH6-202ENST00000411819 NOL3O60936 208 aaKnown RBP16.37■□□□□ 0.21
MSH6-202ENST00000411819 IGKV1-17P01599 117 aa16.37■□□□□ 0.21
MSH6-202ENST00000411819 CRYBB3P26998 211 aa16.37■□□□□ 0.21
MSH6-202ENST00000411819 RND2P52198 227 aa16.37■□□□□ 0.21
MSH6-202ENST00000411819 STHQ8IWL8 128 aa16.37■□□□□ 0.21
MSH6-202ENST00000411819 OR11H2Q8NH07 326 aa16.37■□□□□ 0.21
MSH6-202ENST00000411819 MCUBQ9NWR8 336 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms