RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 C6orf62Q9GZU0 229 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 NAA60Q9H7X0 242 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 TP53TG1Q9Y2A0 90 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 TMEM56-RWDD3S4R434 201 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 TRAV30A0A087WSZ9 112 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 KIR2DL5BA0A0G2JN68 375 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 KIR2DL5BA0A0G2JPC4 375 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 CRYM-AS1A6NIL9 109 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 CHEK1O14757 476 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 TMEM50AO95807 157 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 ETV6P41212 452 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 HTR2BP41595 481 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 ZNF600Q6ZNG1 722 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 KIR2DL5AQ8N109 375 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 OR4C16Q8NGL9 310 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 KIR2DL5BQ8NHK3 375 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 GALNT14Q96FL9 552 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 SOSTQ9BQB4 213 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 SLIRPQ9GZT3 109 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 DNAH7Q8WXX0 4024 aa10.84□□□□□ -0.67
NIF3L1-205ENST00000409588 RPS10-NUDT3A0A1W2PQS6 291 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 H3BMQ9 156 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 OR5AC1P0C628 307 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 TNFSF8P32971 234 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 FAUP35544 74 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 HOXA1P49639 335 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 IZUMO4Q1ZYL8 232 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 BSXQ3C1V8 233 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 WFDC3Q8IUB2 231 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 OR51S1Q8NGJ8 323 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 OR4X1Q8NH49 305 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 TMEM231Q9H6L2 316 aa10.83□□□□□ -0.68
NIF3L1-205ENST00000409588 A0A1W2PS18 150 aa10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 RNASE2P10153 161 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 ANXA3P12429 323 aa10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 ATP5IP56385 69 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 AP3S2P59780 193 aa10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 SRPXP78539 464 aa10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 TOMM20LQ6UXN7 152 aa10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 SELENOHQ8IZQ5 122 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 MCFD2Q8NI22 146 aa10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 RNASEH2CQ8TDP1 164 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 RNF2Q99496 336 aa10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 WFDC10AQ9H1F0 79 aa10.82□□□□□ -0.68
NIF3L1-205ENST00000409588 TRAV2A0A0B4J234 112 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 CLN5O75503 358 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 SLC25A4P12235 298 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 NPPCP23582 126 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 C2orf83Q53S99 150 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 ETFRF1Q6IPR1 90 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 Q6ZRM9 215 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 STPG3Q8N7X2 389 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 VSIRQ9H7M9 311 aa10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 HEYLQ9NQ87 328 aaPredicted RBP10.81□□□□□ -0.68
NIF3L1-205ENST00000409588 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 DFFBO76075 338 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 S100A5P33763 92 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 OPRK1P41145 380 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 TMEM268Q5VZI3 342 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 FAM90A2PQ658T7 463 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 FAAP20Q6NZ36 180 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 GPR146Q96CH1 333 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 NARS2Q96I59 477 aaKnown RBP10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 OVOL2Q9BRP0 275 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 PUS1Q9Y606 427 aaKnown RBP eCLIP10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 SELENOKQ9Y6D0 94 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 U3KQ87 197 aa10.8□□□□□ -0.68
NIF3L1-205ENST00000409588 IGHV3OR16-8A0A075B7F1 116 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 A0A0B4J2A0 478 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 A0A0G2JRQ6 117 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 SPRY2O43597 315 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 IGHV3-48P01763 117 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 SULT1A3P0DMM9 295 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 SULT1A4P0DMN0 295 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 ATF4P18848 351 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 CCR6P51684 374 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 ODF3L2Q3SX64 289 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 SPINK9Q5DT21 86 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 ZFAND6Q6FIF0 208 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 TMEM230Q96A57 120 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 ZNF414Q96IQ9 312 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 MCUBQ9NWR8 336 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 SHPKQ9UHJ6 478 aa10.79□□□□□ -0.68
NIF3L1-205ENST00000409588 LCE6AA0A183 80 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 CEBPZOSA8MTT3 80 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 ZNF701M0R085 212 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 EIF2B2P49770 351 aaKnown RBP10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 YPEL3P61236 119 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 TMEM187Q14656 261 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 NMSQ5H8A3 153 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 LGI3Q8N145 548 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 TOMM5Q8N4H5 51 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 LHFPL5Q8TAF8 219 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 GRAMD2BQ96HH9 432 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 METTL26Q96S19 204 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 SLC25A21Q9BQT8 299 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 MAP6D1Q9H9H5 199 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 RETNQ9HD89 108 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 CACNG5Q9UF02 275 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 215.4 ms