RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ZNF503Q96F45 646 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 OR2V2Q96R30 315 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 WASHC3Q9Y3C0 194 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 SMIM21Q3B7S5 101 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 ERASQ7Z444 233 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 OR4S2Q8NH73 311 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 ZNF596Q8TC21 504 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 FAM168AQ92567 244 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 DCTN5Q9BTE1 182 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 ZNF355PQ9NSJ1 428 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 MSRB2Q9Y3D2 182 aa12.63□□□□□ -0.39
LIMS2-205ENST00000409455 OR4C46A6NHA9 309 aa12.62□□□□□ -0.39
LIMS2-205ENST00000409455 TOX4O94842 621 aa12.62□□□□□ -0.39
LIMS2-205ENST00000409455 OR4A47Q6IF82 309 aa12.62□□□□□ -0.39
LIMS2-205ENST00000409455 C9orf106Q8NAJ2 232 aa12.62□□□□□ -0.39
LIMS2-205ENST00000409455 ABHD17AQ96GS6 310 aa12.62□□□□□ -0.39
LIMS2-205ENST00000409455 JPT1Q9UK76 154 aa12.62□□□□□ -0.39
LIMS2-205ENST00000409455 HSPE1P61604 102 aaKnown RBP12.62□□□□□ -0.39
LIMS2-205ENST00000409455 ST6GALNAC6Q969X2 333 aa12.62□□□□□ -0.39
LIMS2-205ENST00000409455 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
LIMS2-205ENST00000409455 FOXA2Q9Y261 457 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-205ENST00000409455 TAX1BP3O14907 124 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 CNEP1R1Q8N9A8 125 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 NUP35Q8NFH5 326 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 HINT2Q9BX68 163 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 DUSP13Q9UII6 198 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 OR2J3O76001 311 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 CA7P43166 264 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 GUSBP1Q15486 140 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 FAM162BQ5T6X4 162 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 GRAMD2BQ96HH9 432 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 TMEM14BQ9NUH8 114 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 CLEC5AQ9NY25 188 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 DKK4Q9UBT3 224 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 BSNQ9UPA5 3926 aa12.61□□□□□ -0.39
LIMS2-205ENST00000409455 NUDT3O95989 172 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 PSG1P11464 419 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 KIR2DL2P43627 348 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-205ENST00000409455 GPR6P46095 362 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-205ENST00000409455 GDF5OSQ5U4N7 250 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 WDR82Q6UXN9 313 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 C12orf54Q6X4T0 127 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 FAM231DQ6ZW35 169 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 SPATA12Q7Z6I5 190 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-205ENST00000409455 CXXC4Q9H2H0 198 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 C8orf88P0DMB2 117 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 IGHV1-2P23083 117 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 CAMPP49913 170 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 SLC25A34Q6PIV7 304 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 DEFB125Q8N687 156 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 KIR3DL3Q8N743 410 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 OR2T6Q8NHC8 308 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 KLF14Q8TD94 323 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-205ENST00000409455 SNRNP40Q96DI7 357 aaKnown RBP12.6□□□□□ -0.39
LIMS2-205ENST00000409455 MBD6Q96DN6 1003 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 FAM122AQ96E09 287 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 SPTBN4Q9H254 2564 aa12.6□□□□□ -0.39
LIMS2-205ENST00000409455 HSBP1L1C9JCN9 74 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 K7ENP7 123 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 CRXO43186 299 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-205ENST00000409455 IGHV3-13P01766 116 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 IGHV3-7P01780 117 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 MPV17P39210 176 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 UBE2L3P68036 154 aaKnown RBP12.59□□□□□ -0.39
LIMS2-205ENST00000409455 BVES-AS1Q5T3Y7 98 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 VWA1Q6PCB0 445 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 INO80CQ6PI98 192 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-205ENST00000409455 CHRDL1Q9BU40 450 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 PIEZO2Q9H5I5 2752 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 OR2T8A6NH00 312 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 GATA2P23769 480 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-205ENST00000409455 ASPHD1Q5U4P2 390 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 FAM90A1Q86YD7 464 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 IFI27L2Q9H2X8 130 aa12.59□□□□□ -0.39
LIMS2-205ENST00000409455 DSPP15924 2871 aaKnown RBP12.59□□□□□ -0.39
LIMS2-205ENST00000409455 HIGD1CA8MV81 97 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 DLL1O00548 723 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 LYZL6O75951 148 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 ATP5L2Q7Z4Y8 100 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 NUDT10Q8NFP7 164 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 LINC00479Q96M42 142 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 SLC25A33Q9BSK2 321 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 AMMECR1Q9Y4X0 333 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-205ENST00000409455 HIST1H1EP10412 219 aaKnown RBP12.58□□□□□ -0.4
LIMS2-205ENST00000409455 PRR27Q6MZM9 219 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 SEM1Q6ZVN7 128 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 DDB2Q92466 427 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 NUDT11Q96G61 164 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 C1RLQ9NZP8 487 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 OR51B2Q9Y5P1 312 aa12.58□□□□□ -0.4
LIMS2-205ENST00000409455 IGKV1OR2-108A0A075B7D4 117 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 MUC21A0A0G2JKD1 596 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 MUC21A0A140T8X8 626 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 SYS1-DBNDD2H3BUS1 97 aa12.57□□□□□ -0.4
LIMS2-205ENST00000409455 K7ERU9 68 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms