RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RTL8BQ17RB0 113 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 ZNF596Q8TC21 504 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 NEUROG1Q92886 237 aa6.84□□□□□ -1.31
SNX13-201ENST00000409076 IGKV3D-15A0A087WSY6 115 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 BRS3P32247 399 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 ZNF146Q15072 292 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 KLF17Q5JT82 389 aaPredicted RBP6.83□□□□□ -1.32
SNX13-201ENST00000409076 FAM90A1Q86YD7 464 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 C11orf53Q8IXP5 236 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 OR8A1Q8NGG7 326 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 FAM222BQ8WU58 562 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 RAB37Q96AX2 223 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 IL36BQ9NZH7 164 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 HILPDAQ9Y5L2 63 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 TRAV1-1A0A0B4J248 108 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 TDGF1P3P51864 188 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 HSPE1P61604 102 aaKnown RBP6.83□□□□□ -1.32
SNX13-201ENST00000409076 ERHP84090 104 aaKnown RBP6.83□□□□□ -1.32
SNX13-201ENST00000409076 OR52E5Q8NH55 327 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 SARAFQ96BY9 339 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 PAXXQ9BUH6 204 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 GP6Q9HCN6 339 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.83□□□□□ -1.32
SNX13-201ENST00000409076 BMPR1BO00238 502 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 ISLRO14498 428 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 MGST3O14880 152 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 Q6ZT83 130 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 VPS25Q9BRG1 176 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 IL19Q9UHD0 177 aa6.83□□□□□ -1.32
SNX13-201ENST00000409076 AMMECR1Q9Y4X0 333 aaPredicted RBP6.83□□□□□ -1.32
SNX13-201ENST00000409076 IGHV3-66A0A0C4DH42 116 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 E7EUB6 86 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 CNTFRP26992 372 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 SLAQ13239 276 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 C22orf34Q6ZV56 151 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 Q71RC1 249 aaPredicted RBP6.82□□□□□ -1.32
SNX13-201ENST00000409076 POLQO75417 2590 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 C20orf202A1L168 122 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 DPRXA6NFQ7 191 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 IQCF6A8MYZ5 107 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 GGTLC3B5MD39 225 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 K7EM74 188 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 GGCTO75223 188 aaKnown RBP6.82□□□□□ -1.32
SNX13-201ENST00000409076 FAM87AP0C7U9 286 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 C3orf79P0CE67 100 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 STAG3L2P0CL84 134 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 STAG3L3P0CL85 134 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 C10orf113Q5VZT2 155 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 INO80CQ6PI98 192 aaPredicted RBP6.82□□□□□ -1.32
SNX13-201ENST00000409076 LINC00173Q6ZV60 143 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 LINC00596Q86U02 117 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 OR4C5Q8NGB2 326 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 LPAR2Q9HBW0 351 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 MYO9AB2RTY4 2548 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 ZNF891A8MT65 544 aaPredicted RBP6.82□□□□□ -1.32
SNX13-201ENST00000409076 HIGD1CA8MV81 97 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 WNT2P09544 360 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 TMEM177Q53S58 311 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 LINC00305Q7Z4B0 112 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 IFI27L2Q9H2X8 130 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 ASCL3Q9NQ33 180 aa6.82□□□□□ -1.32
SNX13-201ENST00000409076 MBNL3Q9NUK0 354 aaKnown RBP6.82□□□□□ -1.32
SNX13-201ENST00000409076 SLC25A10Q9UBX3 287 aaPredicted RBP6.82□□□□□ -1.32
SNX13-201ENST00000409076 A0A1B0GWJ7 208 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 PMS2P5A8MQ11 134 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 ADH4P08319 380 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 PPOXP50336 477 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 TAS2R45P59539 299 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 UBALD2Q8IYN6 164 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 EXOC3-AS1Q8N2X6 119 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 STPG4Q8N801 248 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 WDR31Q8NA23 367 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 KCNS1Q96KK3 526 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 IDI2-AS1Q9NZ38 188 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 CDC42EP3Q9UKI2 254 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 CBY1Q9Y3M2 126 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 F11RQ9Y624 299 aaKnown RBP6.81□□□□□ -1.32
SNX13-201ENST00000409076 USP9YO00507 2555 aaPredicted RBP6.81□□□□□ -1.32
SNX13-201ENST00000409076 IGKV1OR2-108A0A075B7D4 117 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 FAM90A27PA6NNH2 459 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 FAM90A26D6RGX4 464 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 SFTPCP11686 197 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 TNFSF4P23510 183 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 MAS1LP35410 378 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 RNF7Q9UBF6 113 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 MKRN2OSH3BPM6 223 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 PPIFP30405 207 aaKnown RBP6.81□□□□□ -1.32
SNX13-201ENST00000409076 ERVK11-1P61568 191 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 LYPD2Q6UXB3 125 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 GOLT1AQ6ZVE7 132 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 CIARTQ8N365 385 aaPredicted RBP6.81□□□□□ -1.32
SNX13-201ENST00000409076 OR8B3Q8NGG8 313 aa6.81□□□□□ -1.32
SNX13-201ENST00000409076 COL8A1P27658 744 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 HTR1DP28221 377 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 RPL15P61313 204 aaKnown RBP6.8□□□□□ -1.32
SNX13-201ENST00000409076 C1orf194Q5T5A4 169 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 PDPNQ86YL7 162 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 ONECUT1Q9UBC0 465 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 ADAMTS20P59510 1910 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms