RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 RRNAD1Q96FB5 475 aaKnown RBP16.59■□□□□ 0.25
KDELR3-202ENST00000409006 EPPK1P58107 5090 aaKnown RBP16.59■□□□□ 0.25
KDELR3-202ENST00000409006 MRPS10P82664 201 aaKnown RBP16.58■□□□□ 0.24
KDELR3-202ENST00000409006 MEF2DQ14814 521 aa16.58■□□□□ 0.24
KDELR3-202ENST00000409006 ZNF600Q6ZNG1 722 aa16.58■□□□□ 0.24
KDELR3-202ENST00000409006 SELENOHQ8IZQ5 122 aaKnown RBP16.58■□□□□ 0.24
KDELR3-202ENST00000409006 RNASE11Q8TAA1 199 aaKnown RBP16.58■□□□□ 0.24
KDELR3-202ENST00000409006 DYNC2LI1Q8TCX1 351 aa16.58■□□□□ 0.24
KDELR3-202ENST00000409006 DIRAS2Q96HU8 199 aa16.58■□□□□ 0.24
KDELR3-202ENST00000409006 GINS3Q9BRX5 216 aa16.58■□□□□ 0.24
KDELR3-202ENST00000409006 VSIRQ9H7M9 311 aa16.58■□□□□ 0.24
KDELR3-202ENST00000409006 NAA60Q9H7X0 242 aa16.58■□□□□ 0.24
KDELR3-202ENST00000409006 AGRNO00468 2067 aa16.57■□□□□ 0.24
KDELR3-202ENST00000409006 TEX13DA0A0J9YY54 714 aaPredicted RBP16.57■□□□□ 0.24
KDELR3-202ENST00000409006 SUB1P53999 127 aaKnown RBP eCLIP16.57■□□□□ 0.24
KDELR3-202ENST00000409006 TNFRSF9Q07011 255 aa16.57■□□□□ 0.24
KDELR3-202ENST00000409006 PMS2P11Q13670 270 aa16.57■□□□□ 0.24
KDELR3-202ENST00000409006 IL18Q14116 193 aa16.57■□□□□ 0.24
KDELR3-202ENST00000409006 BSXQ3C1V8 233 aa16.57■□□□□ 0.24
KDELR3-202ENST00000409006 AARDQ4LEZ3 155 aa16.57■□□□□ 0.24
KDELR3-202ENST00000409006 GPR132Q9UNW8 380 aa16.57■□□□□ 0.24
KDELR3-202ENST00000409006 C14orf166Q9Y224 244 aaKnown RBP16.57■□□□□ 0.24
KDELR3-202ENST00000409006 DISC1C4P0D8 188 aa16.56■□□□□ 0.24
KDELR3-202ENST00000409006 CTDSPLO15194 276 aa16.56■□□□□ 0.24
KDELR3-202ENST00000409006 B3GALNT1O75752 331 aa16.56■□□□□ 0.24
KDELR3-202ENST00000409006 DFFBO76075 338 aa16.56■□□□□ 0.24
KDELR3-202ENST00000409006 GPR146Q96CH1 333 aa16.56■□□□□ 0.24
KDELR3-202ENST00000409006 ENY2Q9NPA8 101 aa16.56■□□□□ 0.24
KDELR3-202ENST00000409006 CORTO00230 105 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 CLN5O75503 358 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 AKAIN1P0CW23 69 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 OPRK1P41145 380 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 SPCS3P61009 180 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 FAM24BQ8N5W8 94 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 OR51S1Q8NGJ8 323 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 RAB2BQ8WUD1 216 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 MS4A6AQ9H2W1 248 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 CCDC59Q9P031 241 aaKnown RBP16.55■□□□□ 0.24
KDELR3-202ENST00000409006 CACNG5Q9UF02 275 aa16.55■□□□□ 0.24
KDELR3-202ENST00000409006 CRYM-AS1A6NIL9 109 aa16.54■□□□□ 0.24
KDELR3-202ENST00000409006 RPL5P46777 297 aaKnown RBP16.54■□□□□ 0.24
KDELR3-202ENST00000409006 SURF2Q15527 256 aaPredicted RBP16.54■□□□□ 0.24
KDELR3-202ENST00000409006 FAM219AQ8IW50 185 aa16.54■□□□□ 0.24
KDELR3-202ENST00000409006 OR4X1Q8NH49 305 aa16.54■□□□□ 0.24
KDELR3-202ENST00000409006 OR52E5Q8NH55 327 aa16.54■□□□□ 0.24
KDELR3-202ENST00000409006 RBPMSQ93062 196 aaKnown RBP16.54■□□□□ 0.24
KDELR3-202ENST00000409006 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.54■□□□□ 0.24
KDELR3-202ENST00000409006 PRR13Q9NZ81 148 aa16.54■□□□□ 0.24
KDELR3-202ENST00000409006 CXorf65A6NEN9 183 aa16.53■□□□□ 0.24
KDELR3-202ENST00000409006 CMC4P56277 68 aaPredicted RBP16.53■□□□□ 0.24
KDELR3-202ENST00000409006 TIGITQ495A1 244 aa16.53■□□□□ 0.24
KDELR3-202ENST00000409006 TMEM268Q5VZI3 342 aa16.53■□□□□ 0.24
KDELR3-202ENST00000409006 TMEM230Q96A57 120 aa16.53■□□□□ 0.24
KDELR3-202ENST00000409006 CSTL1Q9H114 145 aa16.53■□□□□ 0.24
KDELR3-202ENST00000409006 ANKRD20A5PA0PJZ0 165 aa16.52■□□□□ 0.24
KDELR3-202ENST00000409006 NXPH3O95157 252 aa16.52■□□□□ 0.24
KDELR3-202ENST00000409006 IGKV1-17P01599 117 aa16.52■□□□□ 0.24
KDELR3-202ENST00000409006 TMBIM6P55061 237 aa16.52■□□□□ 0.24
KDELR3-202ENST00000409006 PAFAH1B2P68402 229 aa16.52■□□□□ 0.24
KDELR3-202ENST00000409006 DHODHQ02127 395 aa16.52■□□□□ 0.24
KDELR3-202ENST00000409006 TMEM170AQ8WVE7 144 aa16.52■□□□□ 0.24
KDELR3-202ENST00000409006 C6orf62Q9GZU0 229 aaPredicted RBP16.52■□□□□ 0.24
KDELR3-202ENST00000409006 RPL11P62913 178 aaKnown RBP16.51■□□□□ 0.23
KDELR3-202ENST00000409006 LEMD1Q68G75 181 aa16.51■□□□□ 0.23
KDELR3-202ENST00000409006 PRRT1Q99946 306 aa16.51■□□□□ 0.23
KDELR3-202ENST00000409006 SLIRPQ9GZT3 109 aaKnown RBP16.51■□□□□ 0.23
KDELR3-202ENST00000409006 HEYLQ9NQ87 328 aaPredicted RBP16.51■□□□□ 0.23
KDELR3-202ENST00000409006 TMEM56-RWDD3S4R434 201 aa16.51■□□□□ 0.23
KDELR3-202ENST00000409006 MPTX1A8MV57 137 aa16.5■□□□□ 0.23
KDELR3-202ENST00000409006 DNASE2O00115 360 aaPredicted RBP16.5■□□□□ 0.23
KDELR3-202ENST00000409006 GSTZ1O43708 216 aaPredicted RBP16.5■□□□□ 0.23
KDELR3-202ENST00000409006 CD5P06127 495 aa16.5■□□□□ 0.23
KDELR3-202ENST00000409006 NPPCP23582 126 aa16.5■□□□□ 0.23
KDELR3-202ENST00000409006 HTR2BP41595 481 aa16.5■□□□□ 0.23
KDELR3-202ENST00000409006 DEFB131AP59861 70 aa16.5■□□□□ 0.23
KDELR3-202ENST00000409006 TMEM187Q14656 261 aa16.5■□□□□ 0.23
KDELR3-202ENST00000409006 PRSS54Q6PEW0 395 aa16.5■□□□□ 0.23
KDELR3-202ENST00000409006 SOSTQ9BQB4 213 aa16.5■□□□□ 0.23
KDELR3-202ENST00000409006 H3BMQ9 156 aa16.49■□□□□ 0.23
KDELR3-202ENST00000409006 CRYBB3P26998 211 aa16.49■□□□□ 0.23
KDELR3-202ENST00000409006 TNFSF8P32971 234 aa16.49■□□□□ 0.23
KDELR3-202ENST00000409006 C2orf83Q53S99 150 aa16.49■□□□□ 0.23
KDELR3-202ENST00000409006 LINC00476Q8WZB0 136 aa16.49■□□□□ 0.23
KDELR3-202ENST00000409006 BCL7BQ9BQE9 202 aa16.49■□□□□ 0.23
KDELR3-202ENST00000409006 RABL2AQ9UBK7 228 aaPredicted RBP16.49■□□□□ 0.23
KDELR3-202ENST00000409006 RABL2BQ9UNT1 228 aa16.49■□□□□ 0.23
KDELR3-202ENST00000409006 CEBPZOSA8MTT3 80 aa16.48■□□□□ 0.23
KDELR3-202ENST00000409006 RBMS2Q15434 407 aaKnown RBP16.48■□□□□ 0.23
KDELR3-202ENST00000409006 CEMP1Q6PRD7 247 aaPredicted RBP16.48■□□□□ 0.23
KDELR3-202ENST00000409006 SLC24A4Q8NFF2 622 aa16.48■□□□□ 0.23
KDELR3-202ENST00000409006 METTL26Q96S19 204 aa16.48■□□□□ 0.23
KDELR3-202ENST00000409006 RABAC1Q9UI14 185 aa16.48■□□□□ 0.23
KDELR3-202ENST00000409006 TRAV2A0A0B4J234 112 aa16.47■□□□□ 0.23
KDELR3-202ENST00000409006 NUPR2A6NF83 97 aa16.47■□□□□ 0.23
KDELR3-202ENST00000409006 IGLC1P0CG04 106 aa16.47■□□□□ 0.23
KDELR3-202ENST00000409006 ATF4P18848 351 aaPredicted RBP16.47■□□□□ 0.23
KDELR3-202ENST00000409006 P2RY1P47900 373 aa16.47■□□□□ 0.23
KDELR3-202ENST00000409006 RND2P52198 227 aa16.47■□□□□ 0.23
KDELR3-202ENST00000409006 SUPT4H1P63272 117 aaKnown RBP16.47■□□□□ 0.23
KDELR3-202ENST00000409006 RARRES2Q99969 163 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms