RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FAM90A2PQ658T7 463 aa14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 LILRB2Q8N423 598 aa14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 IL17DQ8TAD2 202 aa14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 RBPMSQ93062 196 aaKnown RBP14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 ZFAND3Q9H8U3 227 aa14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 PUS1Q9Y606 427 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMARCB1-204ENST00000407422 A0A1B0GU03 582 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 ANKRD20A5PA0PJZ0 165 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 GSTZ1O43708 216 aaPredicted RBP14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 RPL35AP18077 110 aaKnown RBP14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 APOC4P55056 127 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 BSXQ3C1V8 233 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 AARDQ4LEZ3 155 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 FAM219AQ8IW50 185 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 GBGT1Q8N5D6 347 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 ST8SIA2Q92186 375 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 GPR146Q96CH1 333 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 PRRT1Q99946 306 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 RABL2AQ9UBK7 228 aaPredicted RBP14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 CACNG5Q9UF02 275 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 RABL2BQ9UNT1 228 aa14.27□□□□□ -0.12
SMARCB1-204ENST00000407422 IGHV3-66A0A0C4DH42 116 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 CORTO00230 105 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 TNFSF8P32971 234 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 OPRK1P41145 380 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 SPCS3P61009 180 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 DEFB135Q30KP9 77 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 TMEM268Q5VZI3 342 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 ZNF600Q6ZNG1 722 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 SOSTQ9BQB4 213 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 GINS3Q9BRX5 216 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 PRR13Q9NZ81 148 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 DHODHQ02127 395 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 Q6ZWC4 215 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 TCF24Q7RTU0 167 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 OR52E5Q8NH55 327 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 TMEM230Q96A57 120 aa14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 RSL24D1Q9UHA3 163 aaKnown RBP14.26□□□□□ -0.13
SMARCB1-204ENST00000407422 NOL3O60936 208 aaKnown RBP14.25□□□□□ -0.13
SMARCB1-204ENST00000407422 CLN5O75503 358 aa14.25□□□□□ -0.13
SMARCB1-204ENST00000407422 VSIRQ9H7M9 311 aa14.25□□□□□ -0.13
SMARCB1-204ENST00000407422 TMEM56-RWDD3S4R434 201 aa14.25□□□□□ -0.13
SMARCB1-204ENST00000407422 ALMS1Q8TCU4 4167 aa14.25□□□□□ -0.13
SMARCB1-204ENST00000407422 FABP12A6NFH5 140 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 SPRY2O43597 315 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 DFFBO76075 338 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 STPG3Q8N7X2 389 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 OR4X1Q8NH49 305 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 MCFD2Q8NI22 146 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 GALNT14Q96FL9 552 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 MAP6D1Q9H9H5 199 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 MCUBQ9NWR8 336 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 TP53TG1Q9Y2A0 90 aa14.24□□□□□ -0.13
SMARCB1-204ENST00000407422 KIR2DL5BA0A0G2JN68 375 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 KIR2DL5BA0A0G2JPC4 375 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 A0A0J9YWU9 116 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 UBE2CO00762 179 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 NXPH3O95157 252 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 EWSR1Q01844 656 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 TMEM187Q14656 261 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 WFDC3Q8IUB2 231 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 KIR2DL5AQ8N109 375 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 KIR2DL5BQ8NHK3 375 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 HEYLQ9NQ87 328 aaPredicted RBP14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 SCP2D1Q9UJQ7 156 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 BMI1P35226 326 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 HTR2BP41595 481 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 TMEM170AQ8WVE7 144 aa14.23□□□□□ -0.13
SMARCB1-204ENST00000407422 EPPK1P58107 5090 aaKnown RBP14.22□□□□□ -0.13
SMARCB1-204ENST00000407422 CEBPZOSA8MTT3 80 aa14.22□□□□□ -0.13
SMARCB1-204ENST00000407422 IGKV1-17P01599 117 aa14.22□□□□□ -0.13
SMARCB1-204ENST00000407422 TIGITQ495A1 244 aa14.22□□□□□ -0.13
SMARCB1-204ENST00000407422 LYG2Q86SG7 212 aa14.22□□□□□ -0.13
SMARCB1-204ENST00000407422 RNF183Q96D59 192 aa14.22□□□□□ -0.13
SMARCB1-204ENST00000407422 MS4A6AQ9H2W1 248 aa14.22□□□□□ -0.13
SMARCB1-204ENST00000407422 AKR1C4P17516 323 aa14.21□□□□□ -0.13
SMARCB1-204ENST00000407422 RPL11P62913 178 aaKnown RBP14.21□□□□□ -0.13
SMARCB1-204ENST00000407422 SUPT4H1P63272 117 aaKnown RBP14.21□□□□□ -0.13
SMARCB1-204ENST00000407422 C2orf83Q53S99 150 aa14.21□□□□□ -0.13
SMARCB1-204ENST00000407422 KCNIP3Q9Y2W7 256 aa14.21□□□□□ -0.13
SMARCB1-204ENST00000407422 AGRNO00468 2067 aa14.2□□□□□ -0.14
SMARCB1-204ENST00000407422 NPPCP23582 126 aa14.2□□□□□ -0.14
SMARCB1-204ENST00000407422 PAFAH1B2P68402 229 aa14.2□□□□□ -0.14
SMARCB1-204ENST00000407422 PRSS54Q6PEW0 395 aa14.2□□□□□ -0.14
SMARCB1-204ENST00000407422 FAM24BQ8N5W8 94 aa14.2□□□□□ -0.14
SMARCB1-204ENST00000407422 SLC24A4Q8NFF2 622 aa14.2□□□□□ -0.14
SMARCB1-204ENST00000407422 IL22RA2Q969J5 263 aa14.2□□□□□ -0.14
SMARCB1-204ENST00000407422 CD5P06127 495 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 SULT1A3P0DMM9 295 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 SULT1A4P0DMN0 295 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 CMC4P56277 68 aaPredicted RBP14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 TNFRSF9Q07011 255 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 NMSQ5H8A3 153 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 LYZL2Q7Z4W2 148 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 SCGB3A2Q96PL1 93 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 RPS10-NUDT3A0A1W2PQS6 291 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 DNASE2O00115 360 aaPredicted RBP14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 CRYBB3P26998 211 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 RND2P52198 227 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms