RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 C22orf34Q6ZV56 151 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 THAP8Q8NA92 274 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 OR4B1Q8NGF8 309 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 FAM57AQ8TBR7 257 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 TBL2Q9Y4P3 447 aaKnown RBP8.69□□□□□ -1.02
CLIP4-204ENST00000404424 YLPM1P49750 1951 aaKnown RBP8.69□□□□□ -1.02
CLIP4-204ENST00000404424 TRAV5A0A0B4J249 113 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 BMPR1BO00238 502 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 COMPP49747 757 aaPredicted RBP8.69□□□□□ -1.02
CLIP4-204ENST00000404424 TCL1AP56279 114 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 TDRG1Q3Y452 100 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 TMEM200BQ69YZ2 307 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 OR10X1Q8NGY0 326 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF355PQ9NSJ1 428 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 FBXL7Q9UJT9 491 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 PPIAL4EA0A075B759 164 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 A0A1W2PS18 150 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 E7EUB6 86 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 PPIAL4DF5H284 164 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 APCSP02743 223 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 PPIAL4FP0DN26 164 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 FOSL1P15407 271 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 CCL3L1P16619 93 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 SRIP30626 198 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 AMTP48728 403 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 WT1-ASQ06250 92 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 MORN5Q5VZ52 161 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF329Q86UD4 541 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 STXBP6Q8NFX7 210 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 NPIPB3Q92617 1050 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 GRAMD2BQ96HH9 432 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 ATG101Q9BSB4 218 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 FNDC4Q9H6D8 234 aaPredicted RBP8.68□□□□□ -1.02
CLIP4-204ENST00000404424 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 WASHC3Q9Y3C0 194 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 PAM16Q9Y3D7 125 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 PPIAL4AQ9Y536 164 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 SVILO95425 2214 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 CGB1A6NKQ9 187 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 DIRC3C9JPN6 131 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 PEX7O00628 323 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF324O75467 553 aaPredicted RBP8.68□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF137PP52743 207 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 SLC35B1P78383 322 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 ADIPOQQ15848 244 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 KIAA1644Q3SXP7 199 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 ETFRF1Q6IPR1 90 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 SSX8Q7RTT4 187 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 ASCL5Q7RTU5 278 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 MBD6Q96DN6 1003 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 SMIM12Q96EX1 92 aa8.68□□□□□ -1.02
CLIP4-204ENST00000404424 FAM103A1Q9BTL3 118 aaKnown RBP8.68□□□□□ -1.02
CLIP4-204ENST00000404424 MRPL27Q9P0M9 148 aaKnown RBP8.68□□□□□ -1.02
CLIP4-204ENST00000404424 SPENQ96T58 3664 aaKnown RBP8.67□□□□□ -1.02
CLIP4-204ENST00000404424 IGKV1D-37A0A075B6S9 117 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 TMEM178BH3BS89 294 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 NDUFB3O43676 98 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 IGLV2-23P01705 113 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 MC5RP33032 325 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 KRTDAPP60985 99 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF124Q15973 351 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 TBR1Q16650 682 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 VMA21Q3ZAQ7 101 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 LRRC10Q5BKY1 277 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 PATE2Q6UY27 113 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 C19orf35Q6ZS72 473 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 RBMXL3Q8N7X1 1067 aaKnown RBP8.67□□□□□ -1.02
CLIP4-204ENST00000404424 ST6GALNAC6Q969X2 333 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 SAP30LQ9HAJ7 183 aa8.67□□□□□ -1.02
CLIP4-204ENST00000404424 C16orf97H3BN30 126 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 RPLP1P05386 114 aaKnown RBP8.66□□□□□ -1.02
CLIP4-204ENST00000404424 PYYP10082 97 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 LGALS7P47929 136 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 REG1BP48304 166 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 SSBP2P81877 361 aaPredicted RBP8.66□□□□□ -1.02
CLIP4-204ENST00000404424 SSUH2Q9Y2M2 353 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 TNFRSF13BO14836 293 aaPredicted RBP8.66□□□□□ -1.02
CLIP4-204ENST00000404424 FSTL3O95633 263 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 HIST1H1EP10412 219 aaKnown RBP8.66□□□□□ -1.02
CLIP4-204ENST00000404424 ZCCHC24Q8N2G6 241 aaKnown RBP8.66□□□□□ -1.02
CLIP4-204ENST00000404424 Q8N976 141 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 FXYD5Q96DB9 178 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 LINC00479Q96M42 142 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 RCHY1Q96PM5 261 aa8.66□□□□□ -1.02
CLIP4-204ENST00000404424 DPRXA6NFQ7 191 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 VSTM5A8MXK1 200 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 FCN3O75636 299 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 MYCNOSP40205 109 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 PRRX1P54821 245 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 LINC00305Q7Z4B0 112 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 NHLRC2Q8NBF2 726 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 NUDT10Q8NFP7 164 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 TSKUQ8WUA8 353 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 H1FXQ92522 213 aaKnown RBP8.65□□□□□ -1.02
CLIP4-204ENST00000404424 FAM168AQ92567 244 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 PERPQ96FX8 193 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 NUDT11Q96G61 164 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 TMEM68Q96MH6 324 aa8.65□□□□□ -1.02
CLIP4-204ENST00000404424 CA1P00915 261 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms