RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 FAM90A2PQ658T7 463 aa9.42□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BLQ99880 126 aa9.42□□□□□ -0.9
CACNA1C-206ENST00000399595 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
CACNA1C-206ENST00000399595 LRP5O75197 1615 aa9.42□□□□□ -0.9
CACNA1C-206ENST00000399595 ASCC3Q8N3C0 2202 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 A8MXK9 166 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 THBDP07204 575 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 CD24P25063 80 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 DAD1P61803 113 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 NKAPP1Q8N9T2 125 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 TSSC4Q9Y5U2 329 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BKO60814 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BJP06899 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 NBEAP1P0C6P0 100 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BOP23527 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BBP33778 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BDP58876 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BCP62807 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 SRSF3P84103 164 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST2H2BEQ16778 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BHQ93079 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 UBE2E2Q96LR5 201 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BNQ99877 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST1H2BMQ99879 126 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 C8orf31Q8N9H6 132 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 TCF19Q9Y242 345 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 ATP5IP56385 69 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 C6orf226Q5I0X4 101 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 C20orf204Q6ZNR8 217 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 MIR17HGQ75NE6 70 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 BMPERQ8N8U9 685 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 ZNF703Q9H7S9 590 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 GUSBP1Q15486 140 aa9.41□□□□□ -0.9
CACNA1C-206ENST00000399595 HIST3H2BBQ8N257 126 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 LINC00527Q9UJ94 153 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 OR9G1Q8NH87 305 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 ZNF721Q8TF20 911 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 IFI27L1Q96BM0 104 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 A0A1B0GUL6 1792 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 DOCK2Q92608 1830 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 TRBV20-1A0A075B6N2 111 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 TRGV1A0A0A0MS02 117 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 ZNF708P17019 499 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 FSTP19883 344 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 MPV17P39210 176 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 ZP1P60852 638 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 KIAA0040Q15053 153 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 TAL2Q16559 108 aa9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 CIARTQ8N365 385 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 TRPM3Q9HCF6 1732 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-206ENST00000399595 MYO7AQ13402 2215 aa9.4□□□□□ -0.91
CACNA1C-206ENST00000399595 TRAV40A0A0B4J280 105 aa9.4□□□□□ -0.91
CACNA1C-206ENST00000399595 E9PLN8 166 aa9.4□□□□□ -0.91
CACNA1C-206ENST00000399595 SPTSSBQ8NFR3 76 aa9.4□□□□□ -0.91
CACNA1C-206ENST00000399595 TINCRA0A1B0GVN0 87 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 GATA4P43694 442 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 LAGE3Q14657 143 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 C1orf194Q5T5A4 169 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 GNB1LQ9BYB4 327 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 HRKO00198 91 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 LEPROTO15243 131 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 PEX11BO96011 259 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 SLC50A1Q9BRV3 221 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 DOCK1Q14185 1865 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 F8VVB4 439 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 F8VWA3 439 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 RPL39P5Q59GN2 51 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 Q96MF0 132 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 J3QW42 95 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 NPDC1Q9NQX5 325 aaPredicted RBP9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 DRAM1Q8N682 238 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 A0A096LPF7 62 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 TIMM23O14925 209 aa9.39□□□□□ -0.91
CACNA1C-206ENST00000399595 TEX22C9J3V5 150 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 POU2AF1Q16633 256 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 LAMA4Q16363 1823 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 NHSL1Q5SYE7 1610 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 WNT2P09544 360 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A18PA6NE21 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A16PA6NEW6 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A7PA6NKC0 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A22PA8MWA6 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A12PA8MX19 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A5PA8MXJ8 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A23PA8MXZ1 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 AMBPP02760 352 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A15PP0C7V4 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM90A14PP0C7W9 464 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 PRR4Q16378 134 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 CLPSL2Q6UWE3 100 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 RCHY1Q96PM5 261 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 TIMM17AQ99595 171 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms