RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 IGKV1D-37A0A075B6S9 117 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 TRAV5A0A0B4J249 113 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 A0A1W2PPI3 338 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 SSBP2P81877 361 aaPredicted RBP18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 PVRIGQ6DKI7 326 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 WDR73Q6P4I2 378 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 PAXXQ9BUH6 204 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 ZNF355PQ9NSJ1 428 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 FCN1O00602 326 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 IGLV2-8P01709 118 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 MT-ND6P03923 174 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 PRRX1P54821 245 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 OR8I2Q8N0Y5 310 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 CMTM2Q8TAZ6 248 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 CDC42EP3Q9UKI2 254 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 DMXL1Q9Y485 3027 aa18.6■□□□□ 0.57
RABGGTA-202ENST00000399409 ENSAO43768 121 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 ESDP10768 282 aa18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 CRISP2P16562 243 aa18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 IER3P46695 156 aa18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 PAFAH1B2P68402 229 aa18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 CX3CL1P78423 397 aa18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 MRGPRG-AS1Q2M3A8 158 aa18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 PRR30Q53SZ7 412 aaPredicted RBP18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 MORN5Q5VZ52 161 aa18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 ZNF664Q8N3J9 261 aa18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 RALYQ9UKM9 306 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-202ENST00000399409 PATE2Q6UY27 113 aa18.58■□□□□ 0.57
RABGGTA-202ENST00000399409 K7ENP7 123 aa18.58■□□□□ 0.56
RABGGTA-202ENST00000399409 CRYGCP07315 174 aa18.58■□□□□ 0.56
RABGGTA-202ENST00000399409 FSTL3O95633 263 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 STXBP6Q8NFX7 210 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 RITA1Q96K30 269 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 RNASE7Q9H1E1 156 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 TPSG1Q9NRR2 321 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 IGLC7A0M8Q6 106 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 SNURFLB1AK76 121 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 TPPP2P59282 170 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 Q0VG73 95 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 IBA57Q5T440 356 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 C22orf15Q8WYQ4 148 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 MS4A10Q96PG2 267 aa18.57■□□□□ 0.56
RABGGTA-202ENST00000399409 A8MWP6 167 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 RPL27AP46776 148 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 CASP6P55212 293 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 RAB4BP61018 213 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 AMMECR1Q9Y4X0 333 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 IGHV2-26A0A0B4J1V2 119 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 A0A1B0GUS0 222 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 GRIFINA4D1Z8 144 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 NUPR1O60356 82 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 CRYGBP07316 175 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 MGST1P10620 155 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 RANP62826 216 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 ZNF329Q86UD4 541 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 TRGV9Q99603 122 aa18.56■□□□□ 0.56
RABGGTA-202ENST00000399409 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.55■□□□□ 0.56
RABGGTA-202ENST00000399409 SMIM27A0A1W2PRY6 76 aa18.55■□□□□ 0.56
RABGGTA-202ENST00000399409 IGLV1-47P01700 117 aa18.55■□□□□ 0.56
RABGGTA-202ENST00000399409 PERPQ96FX8 193 aa18.55■□□□□ 0.56
RABGGTA-202ENST00000399409 TNFRSF19Q9NS68 423 aa18.55■□□□□ 0.56
RABGGTA-202ENST00000399409 RBP4P02753 201 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 PYYP10082 97 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 PAX2Q02962 417 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 FXYD5Q96DB9 178 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 MRPL36Q9P0J6 103 aaKnown RBP18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 TP53TG3Q9ULZ0 132 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 CORTO00230 105 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 SCGB1D1O95968 90 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 REG1AP05451 166 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 FOXC1Q12948 553 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 ST6GALNAC3Q8NDV1 305 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 BEND2Q8NDZ0 799 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 AKAP13Q12802 2813 aa18.54■□□□□ 0.56
RABGGTA-202ENST00000399409 IGHV3-72A0A0B4J1Y9 119 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 PEX7O00628 323 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 FXYD3Q14802 87 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 TNXAQ16473 311 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 FAM231DQ6ZW35 169 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 MISP3Q96FF7 219 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 CLEC7AQ9BXN2 247 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 CEP250Q9BV73 2442 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 LINC00305Q7Z4B0 112 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 NAGKQ9UJ70 344 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 INSIG2Q9Y5U4 225 aa18.53■□□□□ 0.56
RABGGTA-202ENST00000399409 IGHV3-48P01763 117 aa18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 COMPP49747 757 aaPredicted RBP18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 BAGE3Q86Y29 109 aa18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 BAGE2Q86Y30 109 aa18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 TMEM116Q8NCL8 245 aa18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 SIGLEC9Q9Y336 463 aa18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 RIF1Q5UIP0 2472 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 ASPMQ8IZT6 3477 aa18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 BOD1L1Q8NFC6 3051 aa18.52■□□□□ 0.56
RABGGTA-202ENST00000399409 IGHV1-3A0A0C4DH29 117 aa18.52■□□□□ 0.55
RABGGTA-202ENST00000399409 BUB1B-PAK6H3BSN5 160 aa18.52■□□□□ 0.55
RABGGTA-202ENST00000399409 AMY1AP04745 511 aa18.52■□□□□ 0.55
RABGGTA-202ENST00000399409 ZNF841Q6ZN19 808 aa18.52■□□□□ 0.55
RABGGTA-202ENST00000399409 TMEM136Q6ZRR5 245 aa18.52■□□□□ 0.55
RABGGTA-202ENST00000399409 NDUFAF3Q9BU61 184 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms