RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 HIST1H2BCP62807 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST2H2BEQ16778 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H2BHQ93079 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 VWCEQ96DN2 955 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H2BNQ99877 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H2BMQ99879 126 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 SCRT1Q9BWW7 348 aa7.84□□□□□ -1.15
ATL3-201ENST00000398868 CFHR3Q02985 330 aa7.84□□□□□ -1.16
ATL3-201ENST00000398868 FOXL1Q12952 345 aa7.84□□□□□ -1.16
ATL3-201ENST00000398868 ZXDCQ2QGD7 858 aaPredicted RBP7.84□□□□□ -1.16
ATL3-201ENST00000398868 A0A087WV48 116 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 IL6RP08887 468 aaPredicted RBP7.83□□□□□ -1.16
ATL3-201ENST00000398868 CFHR1Q03591 330 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 Q0VFX4 171 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 TIMM23BQ5SRD1 257 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 DEPPQ9NTK1 212 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 NCOR1O75376 2440 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 GOLGB1Q14789 3259 aaKnown RBP7.83□□□□□ -1.16
ATL3-201ENST00000398868 A8MXK9 166 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 CD55P08174 381 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 PSG7Q13046 419 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 GAGE2BQ13066 116 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 GAGE13Q4V321 117 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 GAGE2EQ4V326 116 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 ARPC1AQ92747 370 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 GAGE2DQ9UEU5 116 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 EPDR1Q9UM22 224 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 A0A1B0GW15 77 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 CD7P09564 240 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 GZMBP10144 247 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 C5orf24Q7Z6I8 188 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 GCSAMQ8N6F7 178 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 NPDC1Q9NQX5 325 aaPredicted RBP7.83□□□□□ -1.16
ATL3-201ENST00000398868 GBF1Q92538 1859 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 MIR17HGQ75NE6 70 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 ZBTB34Q8NCN2 500 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 TNFRSF18Q9Y5U5 241 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 CXCL1P09341 107 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 ERVK11-1P61568 191 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 ACP7Q6ZNF0 438 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 FAM89BQ8N5H3 189 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 RSPO3Q9BXY4 272 aaPredicted RBP7.83□□□□□ -1.16
ATL3-201ENST00000398868 NPCDR1Q9BY65 106 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 PCNX1Q96RV3 2341 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 TRAV14DV4A0A0A6YYC5 116 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 CLDND2Q8NHS1 167 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 C10orf35Q96D05 121 aa7.83□□□□□ -1.16
ATL3-201ENST00000398868 SRSF8Q9BRL6 282 aaKnown RBP7.83□□□□□ -1.16
ATL3-201ENST00000398868 PSCAO43653 123 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 FOXG1P55316 489 aaPredicted RBP7.82□□□□□ -1.16
ATL3-201ENST00000398868 EGR4Q05215 589 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 RTN4RL2Q86UN3 420 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 ZNF525Q8N782 197 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 CARHSP1Q9Y2V2 147 aaKnown RBP7.82□□□□□ -1.16
ATL3-201ENST00000398868 IGKV1D-42A0A075B6H8 117 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 RPL23P62829 140 aaKnown RBP7.82□□□□□ -1.16
ATL3-201ENST00000398868 IGFL4Q6B9Z1 124 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 OR2K2Q8NGT1 345 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 ORAOV1Q8WV07 137 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 COPS9Q8WXC6 57 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 C2orf88Q9BSF0 95 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 RBBP6Q7Z6E9 1792 aaKnown RBP7.82□□□□□ -1.16
ATL3-201ENST00000398868 NUTF2P61970 127 aaKnown RBP7.82□□□□□ -1.16
ATL3-201ENST00000398868 MARS2Q96GW9 593 aaKnown RBP7.82□□□□□ -1.16
ATL3-201ENST00000398868 HIST1H2BLQ99880 126 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 PRDM13Q9H4Q3 707 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 TRPM7Q96QT4 1865 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 GATA4P43694 442 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 PSG9Q00887 426 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 VGLL1Q99990 258 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 UBE2CO00762 179 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 ESDP10768 282 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 CD59P13987 128 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 CNTFRP26992 372 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 SELENOTP62341 195 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 ROS1P08922 2347 aa7.82□□□□□ -1.16
ATL3-201ENST00000398868 USF3Q68DE3 2245 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 C17orf98A8MV24 154 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 DLEU1O43261 78 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 THBDP07204 575 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 LINC00596Q86U02 117 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 OR5P3Q8WZ94 311 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 NYNRINQ9P2P1 1898 aaKnown RBP7.81□□□□□ -1.16
ATL3-201ENST00000398868 TSPOP30536 169 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 RUSC1-AS1Q66K80 236 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 LCN12Q6JVE5 192 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 THSD7AQ9UPZ6 1657 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 LY75O60449 1722 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 NBASA2RRP1 2371 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 TRBV5-3A0A0A0MS03 114 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 IGLV1-36A0A0B4J1U3 117 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 KBTBD11-OT1A0A1B0GTJ5 212 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 CYP2G1PQ6ZSU1 146 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 A8MWV9 139 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 NPIPB4C9JG80 1138 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 SDF2L1Q9HCN8 221 aa7.81□□□□□ -1.16
ATL3-201ENST00000398868 VMO1Q7Z5L0 202 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms