RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 JOSD1Q15040 202 aaPredicted RBP10.32□□□□□ -0.76
SOCS6-201ENST00000397942 PYY3Q5JQD4 70 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 RNF166Q96A37 237 aaPredicted RBP10.32□□□□□ -0.76
SOCS6-201ENST00000397942 NMUP48645 174 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 CTAG1AP78358 180 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 DGAT2L7PQ6IED9 249 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 ZNF462Q96JM2 2506 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 A0A1W2PRE2 83 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 TBR1Q16650 682 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 ZNF585BQ52M93 769 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 COQ2Q96H96 371 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 PF4V1P10720 104 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 PRB3Q04118 309 aaPredicted RBP10.32□□□□□ -0.76
SOCS6-201ENST00000397942 RNFT1Q5M7Z0 435 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 SLC25A34Q6PIV7 304 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 SPSB3Q6PJ21 355 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 FAM57AQ8TBR7 257 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 IGHV3OR16-8A0A075B7F1 116 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 LINC00473A8K010 186 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 HBBP68871 147 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 Q6P435 159 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 C12orf54Q6X4T0 127 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 LINC01551Q86U37 167 aa10.32□□□□□ -0.76
SOCS6-201ENST00000397942 FBLL1A6NHQ2 334 aaKnown RBP10.31□□□□□ -0.76
SOCS6-201ENST00000397942 NPIPB11E5RHQ5 1161 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 SCGB1C2P0DMR2 95 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 MBNL2Q5VZF2 373 aaKnown RBP10.31□□□□□ -0.76
SOCS6-201ENST00000397942 TMEM136Q6ZRR5 245 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 TRAV30A0A087WSZ9 112 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 PLSCR4Q9NRQ2 329 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 HLA-DRB1P01911 266 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 WFDC3Q8IUB2 231 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 MDS2Q8NDY4 140 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 RNASEH2CQ8TDP1 164 aaKnown RBP10.31□□□□□ -0.76
SOCS6-201ENST00000397942 C14orf144Q96I85 54 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 ELOVL5Q9NYP7 299 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 LOC105371242A0A075B767 164 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 MLNRO43193 412 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 C2orf83Q53S99 150 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 NDUFAF3Q9BU61 184 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 COL25A1Q9BXS0 654 aaPredicted RBP10.31□□□□□ -0.76
SOCS6-201ENST00000397942 MED12LQ86YW9 2145 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 A0A1B0GW64 132 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 PYYP10082 97 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 LOXL3P58215 753 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 PRCDQ00LT1 54 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 TWIST1Q15672 202 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 HIST3H2BBQ8N257 126 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 PRDM13Q9H4Q3 707 aa10.31□□□□□ -0.76
SOCS6-201ENST00000397942 SEPSECSQ9HD40 501 aaKnown RBP10.31□□□□□ -0.76
SOCS6-201ENST00000397942 SIAH2O43255 324 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 AGMATQ9BSE5 352 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 MBNL3Q9NUK0 354 aaKnown RBP10.3□□□□□ -0.76
SOCS6-201ENST00000397942 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.3□□□□□ -0.76
SOCS6-201ENST00000397942 PPP1R27Q86WC6 154 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 OR10W1Q8NGF6 305 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 MYOZ3Q8TDC0 251 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 RNASE6Q93091 150 aaKnown RBP10.3□□□□□ -0.76
SOCS6-201ENST00000397942 DERL1Q9BUN8 251 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 ANAPC10Q9UM13 185 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 UTRNP46939 3433 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 A6NDN8 102 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 HIGD1CA8MV81 97 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 Q1RN00 199 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 TCF24Q7RTU0 167 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 OR10AG1Q8NH19 301 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 ZFP30Q9Y2G7 519 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 CHD3Q12873 2000 aaKnown RBP10.3□□□□□ -0.76
SOCS6-201ENST00000397942 LOC102724200A0A096LPH7 203 aaPredicted RBP10.3□□□□□ -0.76
SOCS6-201ENST00000397942 LYNX1G3V0Z9 82 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 IGHV1-46P01743 117 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 LYNX1P0DP58 116 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 SRSF9Q13242 221 aaKnown RBP eCLIP10.3□□□□□ -0.76
SOCS6-201ENST00000397942 IL15RAQ13261 267 aa10.3□□□□□ -0.76
SOCS6-201ENST00000397942 K7ERU9 68 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 C1QL4Q86Z23 238 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 TMEM70Q9BUB7 260 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 IGHV3-49A0A0A0MS15 119 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 AMBPP02760 352 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 FAM90A2PQ658T7 463 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 NRN1Q9NPD7 142 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 TRAV3A0A0B4J244 114 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 CSRP1P21291 193 aaKnown RBP10.29□□□□□ -0.76
SOCS6-201ENST00000397942 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 CD177Q8N6Q3 437 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 C16orf92Q96LL3 132 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 OSTCQ9NRP0 149 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 NACAE9PAV3 2078 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 GFRA3O60609 400 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 TIMP3P35625 211 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 SAPCD1Q5SSQ6 148 aa10.29□□□□□ -0.76
SOCS6-201ENST00000397942 FOXA2Q9Y261 457 aaPredicted RBP10.29□□□□□ -0.76
SOCS6-201ENST00000397942 LY6G6EA0A0G2JKS1 128 aa10.28□□□□□ -0.76
SOCS6-201ENST00000397942 ATG101Q9BSB4 218 aa10.28□□□□□ -0.76
SOCS6-201ENST00000397942 C21orf62Q9NYP8 219 aa10.28□□□□□ -0.76
SOCS6-201ENST00000397942 U3KQA8 63 aa10.28□□□□□ -0.76
SOCS6-201ENST00000397942 CA1P00915 261 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 864 ms