RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CLCF1Q9UBD9 225 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 SPENQ96T58 3664 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 ZFHX4Q86UP3 3567 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 CGAP01215 116 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 HLA-DRB1P01911 266 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 AREGP15514 252 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 GATA2P23769 480 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 LGALS7P47929 136 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 CENPWQ5EE01 88 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 TEPPQ6URK8 271 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 ZNRF1Q8ND25 227 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 TMEM186Q96B77 213 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 RNASE7Q9H1E1 156 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 JPT1Q9UK76 154 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 ARL2-SNX15V9GYD0 113 aa13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 HEATR1Q9H583 2144 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-201ENST00000397901 IZUMO1RA6ND01 250 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 ISLRO14498 428 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 IGFBP2P18065 325 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 CRYBB3P26998 211 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 SLAQ13239 276 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 SAMD13Q5VXD3 122 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 GTF2H5Q6ZYL4 71 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 ASPMQ8IZT6 3477 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 OTOGLQ3ZCN5 2332 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 HELTA6NFD8 242 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 LOXL3P58215 753 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 FXYD3Q14802 87 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 PRSS57Q6UWY2 283 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 MIR17HGQ75NE6 70 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 DEFB124Q8NES8 71 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 CLUHP3Q96NS8 147 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 SAP30LQ9HAJ7 183 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 TNFRSF19Q9NS68 423 aa13.06□□□□□ -0.32
CHMP1A-201ENST00000397901 CRXO43186 299 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 FTH1P19P0C7X4 201 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 HIST1H1AQ02539 215 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 UFSP1Q6NVU6 142 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 RNASEKQ6P5S7 137 aaKnown RBP13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 DOLPP1Q86YN1 238 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 SPACA3Q8IXA5 215 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 TMEM178AQ8NBL3 297 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 WIPF2Q8TF74 440 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 TECRQ9NZ01 308 aaKnown RBP13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 C15orf61A6NNL5 157 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 TIGITQ495A1 244 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 SPRNQ5BIV9 151 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
CHMP1A-201ENST00000397901 AHRRA9YTQ3 701 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 KIR2DL2P43627 348 aaPredicted RBP13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 SRSF6Q13247 344 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 C5orf17Q8NAS9 161 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 FAM216AQ8WUB2 273 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 ENY2Q9NPA8 101 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 SPAARA0A1B0GVQ0 90 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 C7orf71A4D174 169 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 MGST3O14880 152 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 NKX2-8O15522 239 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 SCGB1A1P11684 91 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 PSG5Q15238 335 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 KIR3DL3Q8N743 410 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 C9orf106Q8NAJ2 232 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 CHRDL1Q9BU40 450 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 OR51B2Q9Y5P1 312 aa13.04□□□□□ -0.32
CHMP1A-201ENST00000397901 TRGV8A0A0C4DH27 118 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 hDV102S1A0JD36 115 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 GPR6P46095 362 aaPredicted RBP13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 RAB31Q13636 194 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 MOB3BQ86TA1 216 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 SCRT2Q9NQ03 307 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 CALYQ9NYX4 217 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 CADP27708 2225 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 SRRM5B3KS81 715 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 MSMPQ1L6U9 139 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 IBA57Q5T440 356 aaKnown RBP13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 DDB2Q92466 427 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 CLEC5AQ9NY25 188 aa13.03□□□□□ -0.32
CHMP1A-201ENST00000397901 IGHV1-18A0A0C4DH31 117 aa13.02□□□□□ -0.32
CHMP1A-201ENST00000397901 SAA2P0DJI9 122 aaPredicted RBP13.02□□□□□ -0.32
CHMP1A-201ENST00000397901 HSPE1P61604 102 aaKnown RBP13.02□□□□□ -0.32
CHMP1A-201ENST00000397901 FAM201AQ5SY85 155 aa13.02□□□□□ -0.32
CHMP1A-201ENST00000397901 FAM162BQ5T6X4 162 aa13.02□□□□□ -0.32
CHMP1A-201ENST00000397901 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.32
CHMP1A-201ENST00000397901 OR1N2Q8NGR9 330 aa13.02□□□□□ -0.32
CHMP1A-201ENST00000397901 SVILO95425 2214 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 F2RL2O00254 374 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 KIR2DS2P43631 304 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 CT45A1Q5HYN5 189 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 NEGR1Q7Z3B1 354 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 MOGAT3Q86VF5 341 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 OR2T6Q8NHC8 308 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 CT45A3Q8NHU0 189 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 PPP1R35Q8TAP8 253 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 TMEM191AQ9H0A3 160 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 SERTAD4Q9NUC0 356 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 IDI2-AS1Q9NZ38 188 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 ZNF318Q5VUA4 2279 aa13.02□□□□□ -0.33
CHMP1A-201ENST00000397901 DMXL1Q9Y485 3027 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 FAM231BA6NCW3 169 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms