RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 IGHV3-23P01764 117 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 SULT1A3P0DMM9 295 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 SULT1A4P0DMN0 295 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 DEFB135Q30KP9 77 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 TM4SF20Q53R12 229 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 NMSQ5H8A3 153 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 GGNBP1Q5YKI7 109 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 THOC7Q6I9Y2 204 aaKnown RBP11.95□□□□□ -0.5
CUX2-202ENST00000397643 BTNL8Q6UX41 500 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 FANCD2OSQ96PS1 177 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.95□□□□□ -0.5
CUX2-202ENST00000397643 ZNF257Q9Y2Q1 563 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 NSG2Q9Y328 171 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 OR51B2Q9Y5P1 312 aa11.95□□□□□ -0.5
CUX2-202ENST00000397643 A0A0B4J293 547 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 A0A1B0GU03 582 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 A0A1B0GW64 132 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 C7orf66A4D0T2 115 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 HMX3A6NHT5 357 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 C15orf61A6NNL5 157 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 SSNA1O43805 119 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 ADAP1O75689 374 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 ARL3P36405 182 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 RPL27AP46776 148 aaKnown RBP11.94□□□□□ -0.5
CUX2-202ENST00000397643 OR2B8PP59922 312 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 IZUMO4Q1ZYL8 232 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 OR1L8Q8NGR8 309 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 GATAD1Q8WUU5 269 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 TMEM14BQ9NUH8 114 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 CACNG5Q9UF02 275 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 CACFD1Q9UGQ2 172 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 FBXL7Q9UJT9 491 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 ALG5Q9Y673 324 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 S4R3C0 116 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 PKHD1P08F94 4074 aa11.94□□□□□ -0.5
CUX2-202ENST00000397643 DNAH2Q9P225 4427 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 TEX50A0A1B0GTY4 177 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 DBX1A6NMT0 343 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 E7EUB6 86 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 SLC25A6P12236 298 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 KLK9Q2XQG4 91 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 CLEC19AQ6UXS0 136 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 Q6ZRM9 215 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 OR5B3Q8NH48 314 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 PHLDA1Q8WV24 401 aaPredicted RBP11.93□□□□□ -0.5
CUX2-202ENST00000397643 PDCD10Q9BUL8 212 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 KLK9Q9UKQ9 250 aa11.93□□□□□ -0.5
CUX2-202ENST00000397643 NPIPB5A8MRT5 1133 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 IFNA17P01571 189 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 TRAPPC2P0DI81 140 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 TRAPPC2BP0DI82 140 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 APOC4P55056 127 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 HSPE1P61604 102 aaKnown RBP11.92□□□□□ -0.5
CUX2-202ENST00000397643 OR1L6Q8NGR2 347 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 OR1S1Q8NH92 325 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 RNF183Q96D59 192 aa11.92□□□□□ -0.5
CUX2-202ENST00000397643 FYTTD1Q96QD9 318 aaKnown RBP11.92□□□□□ -0.5
CUX2-202ENST00000397643 QTRT1Q9BXR0 403 aaKnown RBP11.92□□□□□ -0.5
CUX2-202ENST00000397643 TRAV25A0A0B4J276 109 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 ZNF320A2RRD8 509 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 C5orf51A6NDU8 294 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 FAM25EA8MYX2 175 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 ST8SIA3O43173 380 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 MYOD1P15172 320 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 PRR20EP86478 221 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 PRR20CP86479 221 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 PRR20DP86480 221 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 PRR20BP86481 221 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 PRR20AP86496 221 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 OR52E5Q8NH55 327 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 SRSF8Q9BRL6 282 aaKnown RBP11.91□□□□□ -0.5
CUX2-202ENST00000397643 HINT2Q9BX68 163 aa11.91□□□□□ -0.5
CUX2-202ENST00000397643 KIR2DL5BA0A0G2JN68 375 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 KIR2DL5BA0A0G2JPC4 375 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 UBE2CO00762 179 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 CCSO14618 274 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 CRYGCP07315 174 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 AREGP15514 252 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 SPCS3P61009 180 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 IAH1Q2TAA2 248 aaPredicted RBP11.9□□□□□ -0.5
CUX2-202ENST00000397643 AARDQ4LEZ3 155 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 GSG1LQ6UXU4 331 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 HSD17B13Q7Z5P4 300 aaPredicted RBP11.9□□□□□ -0.5
CUX2-202ENST00000397643 KIR2DL5AQ8N109 375 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 MED28Q9H204 178 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 NDUFA4L2Q9NRX3 87 aa11.9□□□□□ -0.5
CUX2-202ENST00000397643 MFSD2BA6NFX1 497 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 GOSR2O14653 212 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 PRCDQ00LT1 54 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 ODF3L2Q3SX64 289 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 OR2C3Q8N628 320 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 MARC2Q969Z3 335 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 EEF1AKMT3Q96AZ1 226 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 ENY2Q9NPA8 101 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 GSKIPQ9P0R6 139 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms