RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 TMEM222Q9H0R3 208 aa13.25□□□□□ -0.29
CXCL12-204ENST00000395793 RGS5O15539 181 aa13.24□□□□□ -0.29
CXCL12-204ENST00000395793 DFFBO76075 338 aa13.24□□□□□ -0.29
CXCL12-204ENST00000395793 ATG12O94817 140 aa13.24□□□□□ -0.29
CXCL12-204ENST00000395793 AARDQ4LEZ3 155 aa13.24□□□□□ -0.29
CXCL12-204ENST00000395793 C15orf40Q8WUR7 153 aa13.24□□□□□ -0.29
CXCL12-204ENST00000395793 SMIM4Q8WVI0 70 aa13.24□□□□□ -0.29
CXCL12-204ENST00000395793 RRNAD1Q96FB5 475 aaKnown RBP13.24□□□□□ -0.29
CXCL12-204ENST00000395793 PDCD10Q9BUL8 212 aa13.24□□□□□ -0.29
CXCL12-204ENST00000395793 AGRNO00468 2067 aa13.24□□□□□ -0.29
CXCL12-204ENST00000395793 CDS2O95674 445 aa13.23□□□□□ -0.29
CXCL12-204ENST00000395793 SSBP1Q04837 148 aaKnown RBP13.23□□□□□ -0.29
CXCL12-204ENST00000395793 GPR141Q7Z602 305 aa13.23□□□□□ -0.29
CXCL12-204ENST00000395793 OR4C16Q8NGL9 310 aa13.23□□□□□ -0.29
CXCL12-204ENST00000395793 CSTL1Q9H114 145 aa13.23□□□□□ -0.29
CXCL12-204ENST00000395793 MS4A6AQ9H2W1 248 aa13.23□□□□□ -0.29
CXCL12-204ENST00000395793 NAA60Q9H7X0 242 aa13.23□□□□□ -0.29
CXCL12-204ENST00000395793 NUPR2A6NF83 97 aa13.22□□□□□ -0.29
CXCL12-204ENST00000395793 CORTO00230 105 aa13.22□□□□□ -0.29
CXCL12-204ENST00000395793 CLN5O75503 358 aa13.22□□□□□ -0.29
CXCL12-204ENST00000395793 IGKV1-17P01599 117 aa13.22□□□□□ -0.29
CXCL12-204ENST00000395793 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
CXCL12-204ENST00000395793 OPRK1P41145 380 aa13.22□□□□□ -0.29
CXCL12-204ENST00000395793 MRPS10P82664 201 aaKnown RBP13.22□□□□□ -0.29
CXCL12-204ENST00000395793 CEMP1Q6PRD7 247 aaPredicted RBP13.22□□□□□ -0.29
CXCL12-204ENST00000395793 SELENOHQ8IZQ5 122 aaKnown RBP13.22□□□□□ -0.29
CXCL12-204ENST00000395793 RNASE11Q8TAA1 199 aaKnown RBP13.22□□□□□ -0.29
CXCL12-204ENST00000395793 C6orf62Q9GZU0 229 aaPredicted RBP13.22□□□□□ -0.29
CXCL12-204ENST00000395793 TEX13DA0A0J9YY54 714 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-204ENST00000395793 MPTX1A8MV57 137 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 B3GALNT1O75752 331 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 RPL5P46777 297 aaKnown RBP13.21□□□□□ -0.29
CXCL12-204ENST00000395793 SUB1P53999 127 aaKnown RBP eCLIP13.21□□□□□ -0.29
CXCL12-204ENST00000395793 CMC4P56277 68 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-204ENST00000395793 DEFB131AP59861 70 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 SPCS3P61009 180 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 MEF2DQ14814 521 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 TIGITQ495A1 244 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 LEMD1Q68G75 181 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 OR4X1Q8NH49 305 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 DYNC2LI1Q8TCX1 351 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 TMEM170AQ8WVE7 144 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 RBPMSQ93062 196 aaKnown RBP13.21□□□□□ -0.29
CXCL12-204ENST00000395793 GPR146Q96CH1 333 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 CACNG5Q9UF02 275 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 GPR132Q9UNW8 380 aa13.21□□□□□ -0.29
CXCL12-204ENST00000395793 C14orf166Q9Y224 244 aaKnown RBP13.21□□□□□ -0.29
CXCL12-204ENST00000395793 CRYM-AS1A6NIL9 109 aa13.2□□□□□ -0.3
CXCL12-204ENST00000395793 CTDSPLO15194 276 aa13.2□□□□□ -0.3
CXCL12-204ENST00000395793 AKAIN1P0CW23 69 aa13.2□□□□□ -0.3
CXCL12-204ENST00000395793 SURF2Q15527 256 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-204ENST00000395793 CLVS1Q8IUQ0 354 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-204ENST00000395793 FAM219AQ8IW50 185 aa13.2□□□□□ -0.3
CXCL12-204ENST00000395793 OR52E5Q8NH55 327 aa13.2□□□□□ -0.3
CXCL12-204ENST00000395793 TMEM230Q96A57 120 aa13.2□□□□□ -0.3
CXCL12-204ENST00000395793 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
CXCL12-204ENST00000395793 TRAV2A0A0B4J234 112 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 DISC1C4P0D8 188 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 LY6G6CO95867 125 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 CD5P06127 495 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 CRYBB3P26998 211 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 PAFAH1B2P68402 229 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 IL18Q14116 193 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 TMEM268Q5VZI3 342 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 OR51S1Q8NGJ8 323 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 DIRAS2Q96HU8 199 aa13.19□□□□□ -0.3
CXCL12-204ENST00000395793 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-204ENST00000395793 CCDC59Q9P031 241 aaKnown RBP13.19□□□□□ -0.3
CXCL12-204ENST00000395793 K7EQG2 157 aa13.18□□□□□ -0.3
CXCL12-204ENST00000395793 DNASE2O00115 360 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-204ENST00000395793 NXPH3O95157 252 aa13.18□□□□□ -0.3
CXCL12-204ENST00000395793 CA1P00915 261 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-204ENST00000395793 IGLC1P0CG04 106 aa13.18□□□□□ -0.3
CXCL12-204ENST00000395793 NPPCP23582 126 aa13.18□□□□□ -0.3
CXCL12-204ENST00000395793 RPL11P62913 178 aaKnown RBP13.18□□□□□ -0.3
CXCL12-204ENST00000395793 DHODHQ02127 395 aa13.18□□□□□ -0.3
CXCL12-204ENST00000395793 RBMS2Q15434 407 aaKnown RBP13.18□□□□□ -0.3
CXCL12-204ENST00000395793 PRSS54Q6PEW0 395 aa13.18□□□□□ -0.3
CXCL12-204ENST00000395793 RARRES2Q99969 163 aa13.18□□□□□ -0.3
CXCL12-204ENST00000395793 RABAC1Q9UI14 185 aa13.18□□□□□ -0.3
CXCL12-204ENST00000395793 ANKRD20A5PA0PJZ0 165 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 GIG44P09565 113 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-204ENST00000395793 HTR2BP41595 481 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 P2RY1P47900 373 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 RND2P52198 227 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 TMEM187Q14656 261 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 C2orf83Q53S99 150 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 TMEM217Q8N7C4 229 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 OR11H2Q8NH07 326 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 PHLDA1Q8WV24 401 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-204ENST00000395793 METTL26Q96S19 204 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 TMEM231Q9H6L2 316 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 HEYLQ9NQ87 328 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-204ENST00000395793 TMEM56-RWDD3S4R434 201 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 U3KQE9 123 aa13.17□□□□□ -0.3
CXCL12-204ENST00000395793 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-204ENST00000395793 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms