RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 SSX8Q7RTT4 187 aa13.69□□□□□ -0.22
SIPA1-201ENST00000394224 WDR31Q8NA23 367 aa13.69□□□□□ -0.22
SIPA1-201ENST00000394224 SLC35E1Q96K37 410 aa13.69□□□□□ -0.22
SIPA1-201ENST00000394224 TMSB15BA0A087X1C1 80 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 C22orf34Q6ZV56 151 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 TMEM178AQ8NBL3 297 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 LAMTOR2Q9Y2Q5 125 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 SLC25A5P05141 298 aaKnown RBP13.68□□□□□ -0.22
SIPA1-201ENST00000394224 FAM27E3Q08E93 113 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 TSKUQ8WUA8 353 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 AMMECR1Q9Y4X0 333 aaPredicted RBP13.68□□□□□ -0.22
SIPA1-201ENST00000394224 TRGV10A0A0A0MS01 117 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 SPAARA0A1B0GVQ0 90 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 HIGD1CA8MV81 97 aa13.68□□□□□ -0.22
SIPA1-201ENST00000394224 ZNF324O75467 553 aaPredicted RBP13.68□□□□□ -0.22
SIPA1-201ENST00000394224 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
SIPA1-201ENST00000394224 C15orf61A6NNL5 157 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 SAA1P0DJI8 122 aaPredicted RBP13.67□□□□□ -0.22
SIPA1-201ENST00000394224 FAM90A1Q86YD7 464 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 ZNF503Q96F45 646 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 SLC45A2Q9UMX9 530 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 MGST3O14880 152 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 COMPP49747 757 aaPredicted RBP13.67□□□□□ -0.22
SIPA1-201ENST00000394224 UBE2G1P62253 170 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 TMEM136Q6ZRR5 245 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 PPP1R35Q8TAP8 253 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 SAP30LQ9HAJ7 183 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 NOTCH3Q9UM47 2321 aa13.67□□□□□ -0.22
SIPA1-201ENST00000394224 IGHV3OR16-8A0A075B7F1 116 aa13.66□□□□□ -0.22
SIPA1-201ENST00000394224 LOXL3P58215 753 aa13.66□□□□□ -0.22
SIPA1-201ENST00000394224 YPEL3P61236 119 aaPredicted RBP13.66□□□□□ -0.22
SIPA1-201ENST00000394224 WASHC3Q9Y3C0 194 aa13.66□□□□□ -0.22
SIPA1-201ENST00000394224 EIF4EBP1Q13541 118 aaPredicted RBP13.66□□□□□ -0.22
SIPA1-201ENST00000394224 INO80CQ6PI98 192 aaPredicted RBP13.66□□□□□ -0.22
SIPA1-201ENST00000394224 MRPL20Q9BYC9 149 aaKnown RBP13.66□□□□□ -0.22
SIPA1-201ENST00000394224 SLC25A17O43808 307 aa13.66□□□□□ -0.22
SIPA1-201ENST00000394224 RUSC1-AS1Q66K80 236 aa13.66□□□□□ -0.22
SIPA1-201ENST00000394224 RNASE8Q8TDE3 154 aaKnown RBP13.66□□□□□ -0.22
SIPA1-201ENST00000394224 TPSG1Q9NRR2 321 aa13.66□□□□□ -0.22
SIPA1-201ENST00000394224 MRPL36Q9P0J6 103 aaKnown RBP13.65□□□□□ -0.22
SIPA1-201ENST00000394224 LSM4Q9Y4Z0 139 aaKnown RBP13.65□□□□□ -0.22
SIPA1-201ENST00000394224 PGPA6NDG6 321 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 PAX1P15863 534 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 TEX43Q6ZNM6 134 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 C1orf174Q8IYL3 243 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 TMEM116Q8NCL8 245 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 MDS2Q8NDY4 140 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 OR10X1Q8NGY0 326 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 KCNS1Q96KK3 526 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 RNF2Q99496 336 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 PROCRQ9UNN8 238 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 MRPS18CQ9Y3D5 142 aaKnown RBP13.65□□□□□ -0.22
SIPA1-201ENST00000394224 TNFAIP6P98066 277 aaPredicted RBP13.65□□□□□ -0.22
SIPA1-201ENST00000394224 VWC2Q2TAL6 325 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 WFDC8Q8IUA0 241 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 WFDC3Q8IUB2 231 aa13.65□□□□□ -0.22
SIPA1-201ENST00000394224 PARD6GQ9BYG4 376 aaPredicted RBP13.65□□□□□ -0.22
SIPA1-201ENST00000394224 MPDU1O75352 247 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 KLF3P57682 345 aaPredicted RBP13.64□□□□□ -0.23
SIPA1-201ENST00000394224 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 CCL25O15444 150 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 CYC1P08574 325 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 CD99P14209 185 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 MUC15Q8N387 334 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 CA7P43166 264 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 SELENOVP59797 346 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 CX3CL1P78423 397 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 RPL19P84098 196 aaKnown RBP13.64□□□□□ -0.23
SIPA1-201ENST00000394224 GDF5OSQ5U4N7 250 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 PAXXQ9BUH6 204 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 HES4Q9HCC6 221 aa13.64□□□□□ -0.23
SIPA1-201ENST00000394224 ACP1P24666 158 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 UQCRFS1P47985 274 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 IGHV3-35A0A0C4DH35 117 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 LOC389332A0A1B0GUA5 103 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 YPEL1O60688 119 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 EBLN2Q6P2I7 272 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 BHLHA15Q7RTS1 189 aaPredicted RBP13.63□□□□□ -0.23
SIPA1-201ENST00000394224 NUP35Q8NFH5 326 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 NUDT10Q8NFP7 164 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 NUDT11Q96G61 164 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 YPEL2Q96QA6 119 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 CELSR1Q9NYQ6 3014 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 C17orf58Q2M2W7 97 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 LINC00305Q7Z4B0 112 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 NIT1Q86X76 327 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 C18orf32Q8TCD1 76 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 RITA1Q96K30 269 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 UQCR10Q9UDW1 63 aa13.63□□□□□ -0.23
SIPA1-201ENST00000394224 AMY1AP04745 511 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 IGLC2P0DOY2 106 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 IGLC3P0DOY3 106 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 OR4C5Q8NGB2 326 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 OR4B1Q8NGF8 309 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 JPT1Q9UK76 154 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 C8orf88P0DMB2 117 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 CEACAM8P31997 349 aaPredicted RBP13.62□□□□□ -0.23
SIPA1-201ENST00000394224 MPV17L2Q567V2 206 aa13.62□□□□□ -0.23
SIPA1-201ENST00000394224 DNLZQ5SXM8 178 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms