RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 INS-IGF2F8WCM5 200 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 CTDSP2O14595 271 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 RGS5O15539 181 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 OR5AC1P0C628 307 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 TAS2R19P59542 299 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 RPL11P62913 178 aaKnown RBP12.17□□□□□ -0.46
PTPRK-208ENST00000392449 ZNF600Q6ZNG1 722 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 RNASE11Q8TAA1 199 aaKnown RBP12.17□□□□□ -0.46
PTPRK-208ENST00000392449 GINS3Q9BRX5 216 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 PDCD10Q9BUL8 212 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 KMT2AQ03164 3969 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 FRAS1Q86XX4 4008 aa12.17□□□□□ -0.46
PTPRK-208ENST00000392449 MPTX1A8MV57 137 aa12.16□□□□□ -0.46
PTPRK-208ENST00000392449 OPRK1P41145 380 aa12.16□□□□□ -0.46
PTPRK-208ENST00000392449 DEFB131AP59861 70 aa12.16□□□□□ -0.46
PTPRK-208ENST00000392449 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
PTPRK-208ENST00000392449 ZFAND1Q8TCF1 268 aa12.16□□□□□ -0.46
PTPRK-208ENST00000392449 RRNAD1Q96FB5 475 aaKnown RBP12.16□□□□□ -0.46
PTPRK-208ENST00000392449 RTBDNQ9BSG5 229 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-208ENST00000392449 C6orf62Q9GZU0 229 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-208ENST00000392449 GABARAPH6UMI1 98 aa12.15□□□□□ -0.46
PTPRK-208ENST00000392449 DEFB4AO15263 64 aa12.15□□□□□ -0.46
PTPRK-208ENST00000392449 NXPH3O95157 252 aa12.15□□□□□ -0.46
PTPRK-208ENST00000392449 RARRES2Q99969 163 aa12.15□□□□□ -0.46
PTPRK-208ENST00000392449 ENY2Q9NPA8 101 aa12.15□□□□□ -0.46
PTPRK-208ENST00000392449 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
PTPRK-208ENST00000392449 AGRNO00468 2067 aa12.15□□□□□ -0.46
PTPRK-208ENST00000392449 DNASE2O00115 360 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-208ENST00000392449 CLN5O75503 358 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 ATG12O94817 140 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 CA1P00915 261 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-208ENST00000392449 PAFAH1B2P68402 229 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 MEF2DQ14814 521 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 BSXQ3C1V8 233 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 TIGITQ495A1 244 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 GLYATL2Q8WU03 294 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 TMEM222Q9H0R3 208 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 RABAC1Q9UI14 185 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 CDS2O95674 445 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPRK-208ENST00000392449 NANOS2P60321 138 aaKnown RBP12.14□□□□□ -0.47
PTPRK-208ENST00000392449 SELENOHQ8IZQ5 122 aaKnown RBP12.14□□□□□ -0.47
PTPRK-208ENST00000392449 OR4C16Q8NGL9 310 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 OR11H2Q8NH07 326 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 PHLDA1Q8WV24 401 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-208ENST00000392449 NAA60Q9H7X0 242 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 CACNG5Q9UF02 275 aa12.14□□□□□ -0.47
PTPRK-208ENST00000392449 C14orf166Q9Y224 244 aaKnown RBP12.14□□□□□ -0.47
PTPRK-208ENST00000392449 TEX13DA0A0J9YY54 714 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-208ENST00000392449 CORTO00230 105 aa12.13□□□□□ -0.47
PTPRK-208ENST00000392449 NPPCP23582 126 aa12.13□□□□□ -0.47
PTPRK-208ENST00000392449 ALDH3B2P48448 385 aa12.13□□□□□ -0.47
PTPRK-208ENST00000392449 CMC4P56277 68 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-208ENST00000392449 GPR141Q7Z602 305 aa12.13□□□□□ -0.47
PTPRK-208ENST00000392449 STXBP6Q8NFX7 210 aa12.13□□□□□ -0.47
PTPRK-208ENST00000392449 OR4X1Q8NH49 305 aa12.13□□□□□ -0.47
PTPRK-208ENST00000392449 SMIM4Q8WVI0 70 aa12.13□□□□□ -0.47
PTPRK-208ENST00000392449 GPR146Q96CH1 333 aa12.13□□□□□ -0.47
PTPRK-208ENST00000392449 MRPS26Q9BYN8 205 aaKnown RBP12.13□□□□□ -0.47
PTPRK-208ENST00000392449 ATF4P18848 351 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-208ENST00000392449 SPCS3P61009 180 aa12.12□□□□□ -0.47
PTPRK-208ENST00000392449 RBMS2Q15434 407 aaKnown RBP12.12□□□□□ -0.47
PTPRK-208ENST00000392449 TMEM268Q5VZI3 342 aa12.12□□□□□ -0.47
PTPRK-208ENST00000392449 RPP25LQ8N5L8 163 aaKnown RBP12.12□□□□□ -0.47
PTPRK-208ENST00000392449 TMEM217Q8N7C4 229 aa12.12□□□□□ -0.47
PTPRK-208ENST00000392449 C15orf40Q8WUR7 153 aa12.12□□□□□ -0.47
PTPRK-208ENST00000392449 GATAD1Q8WUU5 269 aa12.12□□□□□ -0.47
PTPRK-208ENST00000392449 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
PTPRK-208ENST00000392449 RBPMSQ93062 196 aaKnown RBP12.12□□□□□ -0.47
PTPRK-208ENST00000392449 TMEM230Q96A57 120 aa12.12□□□□□ -0.47
PTPRK-208ENST00000392449 FBXL17Q9UF56 701 aa12.12□□□□□ -0.47
PTPRK-208ENST00000392449 CRYBB3P26998 211 aa12.11□□□□□ -0.47
PTPRK-208ENST00000392449 RPL5P46777 297 aaKnown RBP12.11□□□□□ -0.47
PTPRK-208ENST00000392449 P2RY1P47900 373 aa12.11□□□□□ -0.47
PTPRK-208ENST00000392449 IL18Q14116 193 aa12.11□□□□□ -0.47
PTPRK-208ENST00000392449 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
PTPRK-208ENST00000392449 OR51S1Q8NGJ8 323 aa12.11□□□□□ -0.47
PTPRK-208ENST00000392449 METTL26Q96S19 204 aa12.11□□□□□ -0.47
PTPRK-208ENST00000392449 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-208ENST00000392449 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-208ENST00000392449 KLK5Q9Y337 293 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-208ENST00000392449 CRYM-AS1A6NIL9 109 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 KNCNA6PVL3 124 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 DISC1C4P0D8 188 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 K7EQG2 157 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 DEDDO75618 318 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 CD5P06127 495 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 GIG44P09565 113 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-208ENST00000392449 ZNF688P0C7X2 276 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 RND2P52198 227 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 SSBP1Q04837 148 aaKnown RBP12.1□□□□□ -0.47
PTPRK-208ENST00000392449 PRSS54Q6PEW0 395 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 CLVS1Q8IUQ0 354 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-208ENST00000392449 DIRAS2Q96HU8 199 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
PTPRK-208ENST00000392449 TRAV2A0A0B4J234 112 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 B3GALNT1O75752 331 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 IGLC1P0CG04 106 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms