RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 BSPH1Q075Z2 132 aa7.9□□□□□ -1.14
COL6A3-204ENST00000392003 TXNDC17Q9BRA2 123 aa7.9□□□□□ -1.14
COL6A3-204ENST00000392003 SLC25A10Q9UBX3 287 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-204ENST00000392003 LINC00312Q9Y6C7 94 aa7.9□□□□□ -1.14
COL6A3-204ENST00000392003 CFAP47Q6ZTR5 3102 aa7.9□□□□□ -1.15
COL6A3-204ENST00000392003 C17orf100A8MU93 164 aa7.9□□□□□ -1.15
COL6A3-204ENST00000392003 PPP5D1E7EU14 171 aa7.9□□□□□ -1.15
COL6A3-204ENST00000392003 J3QR06 171 aa7.9□□□□□ -1.15
COL6A3-204ENST00000392003 RPL31P62899 125 aaKnown RBP7.9□□□□□ -1.15
COL6A3-204ENST00000392003 GCSAMLQ5JQS6 135 aa7.9□□□□□ -1.15
COL6A3-204ENST00000392003 KCNIP4Q6PIL6 250 aa7.9□□□□□ -1.15
COL6A3-204ENST00000392003 MRPL52Q86TS9 123 aaKnown RBP7.9□□□□□ -1.15
COL6A3-204ENST00000392003 SSMEM1Q8WWF3 244 aa7.9□□□□□ -1.15
COL6A3-204ENST00000392003 GGTLC1Q9BX51 225 aa7.9□□□□□ -1.15
COL6A3-204ENST00000392003 SPTAN1Q13813 2472 aaKnown RBP7.89□□□□□ -1.15
COL6A3-204ENST00000392003 CCL21O00585 134 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 RHOBP62745 196 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 MEF2CQ06413 473 aaPredicted RBP7.89□□□□□ -1.15
COL6A3-204ENST00000392003 TMEM249Q2WGJ8 235 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 TEX36Q5VZQ5 186 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 H1FXQ92522 213 aaKnown RBP7.89□□□□□ -1.15
COL6A3-204ENST00000392003 MGST2Q99735 147 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 TMEM204Q9BSN7 226 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 SAP30LQ9HAJ7 183 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 CA2P00918 260 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 OR8I2Q8N0Y5 310 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 ZCCHC24Q8N2G6 241 aaKnown RBP7.89□□□□□ -1.15
COL6A3-204ENST00000392003 TMEM14BQ9NUH8 114 aa7.89□□□□□ -1.15
COL6A3-204ENST00000392003 TRAV30A0A087WSZ9 112 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 DPRXA6NFQ7 191 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 PLA2G5P39877 138 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 POU2AF1Q16633 256 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 SLC25A48Q6ZT89 311 aaKnown RBP7.88□□□□□ -1.15
COL6A3-204ENST00000392003 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 ZNF439Q8NDP4 499 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 CCL17Q92583 94 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 DSCAMO60469 2012 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 UPK2O00526 184 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 NDUFB3O43676 98 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 OR7C2O60412 319 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 ARL14EPLP0DKL9 152 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 CCKARP32238 428 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 KLRB1Q12918 225 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 CLEC12BQ2HXU8 276 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 ZNF714Q96N38 554 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 SRD5A3Q9H8P0 318 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 ASPMQ8IZT6 3477 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 DMXL2Q8TDJ6 3036 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 NUPR1O60356 82 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 OR10J1P30954 320 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 ARF6P62330 175 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 ADIPOQQ15848 244 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 LRRC10Q5BKY1 277 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 UTF1Q5T230 341 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 C1orf229Q6ZS94 237 aaPredicted RBP7.88□□□□□ -1.15
COL6A3-204ENST00000392003 BTF3L4Q96K17 158 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 VKORC1Q9BQB6 163 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 C20orf144Q9BQM9 153 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 THYN1Q9P016 225 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 ZNF257Q9Y2Q1 563 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 LAMTOR2Q9Y2Q5 125 aa7.88□□□□□ -1.15
COL6A3-204ENST00000392003 TRBV7-9A0A0J9YWB2 115 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 GAGE12BA1L429 117 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 FBLL1A6NHQ2 334 aaKnown RBP7.87□□□□□ -1.15
COL6A3-204ENST00000392003 NDUFB4O95168 129 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 CDKN1AP38936 164 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 ATP5G3P48201 142 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 ATP5IP56385 69 aaPredicted RBP7.87□□□□□ -1.15
COL6A3-204ENST00000392003 OR2T10Q8NGZ9 312 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 UHRF2Q96PU4 802 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 COMMD5Q9GZQ3 224 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 LINC00574Q9H8X3 128 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 DYSFO75923 2080 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 MDFIC2A0A1B0GVS7 189 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 PFN1P07737 140 aaKnown RBP7.87□□□□□ -1.15
COL6A3-204ENST00000392003 CD3EP07766 207 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 TCF23Q7RTU1 214 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 TGIF2LYQ8IUE0 185 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 Q8N7P7 452 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 OR10X1Q8NGY0 326 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 TMEM18Q96B42 140 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 PRSS46E5RG02 174 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 CT45A6P0DMU7 189 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 CT45A5P0DMU8 189 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 CT45A7P0DMV0 189 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 SRP14P37108 136 aaKnown RBP7.87□□□□□ -1.15
COL6A3-204ENST00000392003 PRCDQ00LT1 54 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 STPG3Q8N7X2 389 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 OR51G1Q8NGK1 321 aa7.87□□□□□ -1.15
COL6A3-204ENST00000392003 OSR1Q8TAX0 266 aaPredicted RBP7.87□□□□□ -1.15
COL6A3-204ENST00000392003 ANKHD1Q8IWZ3 2542 aaKnown RBP7.86□□□□□ -1.15
COL6A3-204ENST00000392003 FNDC10F2Z333 226 aa7.86□□□□□ -1.15
COL6A3-204ENST00000392003 GNB1P62873 340 aa7.86□□□□□ -1.15
COL6A3-204ENST00000392003 ERHP84090 104 aaKnown RBP7.86□□□□□ -1.15
COL6A3-204ENST00000392003 OR5B3Q8NH48 314 aa7.86□□□□□ -1.15
COL6A3-204ENST00000392003 LINC01560Q8TB33 94 aa7.86□□□□□ -1.15
COL6A3-204ENST00000392003 HARBI1Q96MB7 349 aa7.86□□□□□ -1.15
COL6A3-204ENST00000392003 TANC2Q9HCD6 1990 aa7.86□□□□□ -1.15
COL6A3-204ENST00000392003 OR2T8A6NH00 312 aa7.86□□□□□ -1.15
COL6A3-204ENST00000392003 GCHFRP30047 84 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms