RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 COMMD5Q9GZQ3 224 aa0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 HS3ST2Q9Y278 367 aa0.28□□□□□ -2.36
SNORA40.4-201ENST00000390971 KIF13BQ9NQT8 1826 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 DPRXA6NFQ7 191 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 EEF1E1-BLOC1S5C9J1V9 151 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 TEX261Q6UWH6 196 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 C3orf56Q8N813 242 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 OR51D1Q8NGF3 324 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 OR10J5Q8NHC4 309 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 PRTFDC1Q9NRG1 225 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 CMTM6Q9NX76 183 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 ERGIC3Q9Y282 383 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 U3KQ87 197 aa0.27□□□□□ -2.37
SNORA40.4-201ENST00000390971 CCDC160A6NGH7 325 aa0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 DEXIO95424 95 aa0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 MAGEA2P43356 314 aa0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 EFNA4P52798 201 aa0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 H1FXQ92522 213 aaKnown RBP0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 ITFG2Q969R8 447 aa0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 TOMM6Q96B49 74 aa0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 MDN1Q9NU22 5596 aa0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 CEP192Q8TEP8 1941 aa0.26□□□□□ -2.37
SNORA40.4-201ENST00000390971 HLA-DRB1P01911 266 aa0.25□□□□□ -2.37
SNORA40.4-201ENST00000390971 ISG15P05161 165 aa0.25□□□□□ -2.37
SNORA40.4-201ENST00000390971 TCL1AP56279 114 aa0.25□□□□□ -2.37
SNORA40.4-201ENST00000390971 NIPSNAP1Q9BPW8 284 aa0.25□□□□□ -2.37
SNORA40.4-201ENST00000390971 NHP2Q9NX24 153 aaKnown RBP0.25□□□□□ -2.37
SNORA40.4-201ENST00000390971 SLC35A3Q9Y2D2 325 aa0.25□□□□□ -2.37
SNORA40.4-201ENST00000390971 PSG9Q00887 426 aa0.24□□□□□ -2.37
SNORA40.4-201ENST00000390971 SLC35B4Q969S0 331 aa0.24□□□□□ -2.37
SNORA40.4-201ENST00000390971 GPR146Q96CH1 333 aa0.24□□□□□ -2.37
SNORA40.4-201ENST00000390971 C11orf68Q9H3H3 251 aaKnown RBP0.24□□□□□ -2.37
SNORA40.4-201ENST00000390971 AHNAKQ09666 5890 aaKnown RBP0.24□□□□□ -2.37
SNORA40.4-201ENST00000390971 MAST4O15021 2626 aa0.24□□□□□ -2.37
SNORA40.4-201ENST00000390971 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 TRAV9-1A0A075B6T8 112 aa0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 BUB1B-PAK6H3BSN5 160 aa0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 PSMD12O00232 456 aaPredicted RBP0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 DCTN3O75935 186 aa0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 SNRPD2P62316 118 aaKnown RBP0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 DEFB113Q30KQ7 82 aa0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 GKN2Q86XP6 184 aa0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 C20orf196Q8IYI0 205 aa0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 MED12Q93074 2177 aa0.23□□□□□ -2.37
SNORA40.4-201ENST00000390971 SNRNP200O75643 2136 aaKnown RBP0.22□□□□□ -2.37
SNORA40.4-201ENST00000390971 EXOC1LA0A1B0GW35 172 aa0.22□□□□□ -2.37
SNORA40.4-201ENST00000390971 DNAL4O96015 105 aa0.22□□□□□ -2.37
SNORA40.4-201ENST00000390971 HIST2H3PS2Q5TEC6 136 aa0.22□□□□□ -2.37
SNORA40.4-201ENST00000390971 OR52E6Q96RD3 313 aa0.22□□□□□ -2.37
SNORA40.4-201ENST00000390971 TMEM56-RWDD3S4R434 201 aa0.22□□□□□ -2.37
SNORA40.4-201ENST00000390971 CDC42P60953 191 aa0.21□□□□□ -2.38
SNORA40.4-201ENST00000390971 SPRNQ5BIV9 151 aa0.21□□□□□ -2.38
SNORA40.4-201ENST00000390971 TRAPPC6BQ86SZ2 158 aa0.21□□□□□ -2.38
SNORA40.4-201ENST00000390971 OR13D1Q8NGV5 346 aa0.21□□□□□ -2.38
SNORA40.4-201ENST00000390971 NIT2Q9NQR4 276 aa0.21□□□□□ -2.38
SNORA40.4-201ENST00000390971 NUP155O75694 1391 aa0.2□□□□□ -2.38
SNORA40.4-201ENST00000390971 CCL25O15444 150 aa0.2□□□□□ -2.38
SNORA40.4-201ENST00000390971 FAM74A1Q5RGS3 127 aa0.2□□□□□ -2.38
SNORA40.4-201ENST00000390971 OSTCQ9NRP0 149 aa0.2□□□□□ -2.38
SNORA40.4-201ENST00000390971 TRAV3A0A0B4J244 114 aa0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 LINC00854A0A1B0GVQ3 168 aa0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 FAAHO00519 579 aa0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 HIST1H1TP22492 207 aaPredicted RBP0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 PSME3P61289 254 aa0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 HIST3H3Q16695 136 aa0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 TMEM86BQ8N661 226 aa0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 ANKRD29Q8N6D5 301 aa0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 TEX47Q8TBZ9 253 aa0.19□□□□□ -2.38
SNORA40.4-201ENST00000390971 FRAS1Q86XX4 4008 aa0.18□□□□□ -2.38
SNORA40.4-201ENST00000390971 CD79AP11912 226 aa0.18□□□□□ -2.38
SNORA40.4-201ENST00000390971 LINC00322Q6ZN03 302 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.4-201ENST00000390971 CLECL1Q8IZS7 167 aa0.18□□□□□ -2.38
SNORA40.4-201ENST00000390971 LINC00301Q8NCQ3 95 aa0.18□□□□□ -2.38
SNORA40.4-201ENST00000390971 OR51V1Q9H2C8 321 aa0.18□□□□□ -2.38
SNORA40.4-201ENST00000390971 V9GYY5 206 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.4-201ENST00000390971 DENND4CQ5VZ89 1909 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 S100A4P26447 101 aaKnown RBP0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 SPCS3P61009 180 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 SPOPLQ6IQ16 392 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 LCA10Q71F78 164 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 PTH2Q96A98 100 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 TSPAN32Q96QS1 320 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 NKIRAS1Q9NYS0 192 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 TMEM14CQ9P0S9 112 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 MAP3K5Q99683 1374 aa0.17□□□□□ -2.38
SNORA40.4-201ENST00000390971 MYO3BQ8WXR4 1341 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 C7orf71A4D174 169 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 OR2J2O76002 312 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 CALB1P05937 261 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 RPL5P46777 297 aaKnown RBP0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 PLPP5Q8NEB5 264 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 MRPS26Q9BYN8 205 aaKnown RBP0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 PLAC8Q9NZF1 115 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 EPDR1Q9UM22 224 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 MUC5ACP98088 5654 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
SNORA40.4-201ENST00000390971 CACNA1EQ15878 2313 aa0.15□□□□□ -2.38
SNORA40.4-201ENST00000390971 TRBV6-4A0A1B0GX49 114 aa0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 OR2T8A6NH00 312 aa0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 TNNC2P02585 160 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms