RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ANKRD11Q6UB99 2663 aaPredicted RBP12.07□□□□□ -0.48
SCFD2-201ENST00000388940 CD3EP07766 207 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 CRYBB3P26998 211 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 THAP8Q8NA92 274 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 FAM167A-AS1Q96KT0 104 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 DLEU1O43261 78 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 GCGP01275 180 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 HNF1AP20823 631 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 GNG4P50150 75 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 FOXC1Q12948 553 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 MRGPRG-AS1Q2M3A8 158 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 PVRIGQ6DKI7 326 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 TEX45Q8NA69 505 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 TMEM18Q96B42 140 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 FNDC4Q9H6D8 234 aaPredicted RBP12.06□□□□□ -0.48
SCFD2-201ENST00000388940 PCNX1Q96RV3 2341 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 PPOXP50336 477 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 ZNF90Q03938 601 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 PRSS8Q16651 343 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 OR1L4Q8NGR5 311 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 SLC25A2Q9BXI2 301 aa12.06□□□□□ -0.48
SCFD2-201ENST00000388940 GVINP1Q7Z2Y8 2422 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 TCRBV4S1A1TA0A5B7 111 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 GGTLC3B5MD39 225 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 GZMBP10144 247 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 ZNF25P17030 456 aaPredicted RBP12.05□□□□□ -0.48
SCFD2-201ENST00000388940 LGALS4P56470 323 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 SELENOTP62341 195 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 CENPWQ5EE01 88 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 RALYQ9UKM9 306 aaKnown RBP12.05□□□□□ -0.48
SCFD2-201ENST00000388940 V9GYV3 84 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 IGKV1D-37A0A075B6S9 117 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.05□□□□□ -0.48
SCFD2-201ENST00000388940 SLC25A17O43808 307 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
SCFD2-201ENST00000388940 RPEL1Q2QD12 228 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 C10orf55Q5SWW7 151 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 MRPL41Q8IXM3 137 aaKnown RBP12.05□□□□□ -0.48
SCFD2-201ENST00000388940 GBGT1Q8N5D6 347 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 OSTCQ9NRP0 149 aa12.05□□□□□ -0.48
SCFD2-201ENST00000388940 ERVFC1-1P60608 527 aa12.04□□□□□ -0.48
SCFD2-201ENST00000388940 TIGITQ495A1 244 aa12.04□□□□□ -0.48
SCFD2-201ENST00000388940 SVIPQ8NHG7 77 aa12.04□□□□□ -0.48
SCFD2-201ENST00000388940 NPIPB3Q92617 1050 aa12.04□□□□□ -0.48
SCFD2-201ENST00000388940 SCNM1Q9BWG6 230 aa12.04□□□□□ -0.48
SCFD2-201ENST00000388940 ROS1P08922 2347 aa12.04□□□□□ -0.48
SCFD2-201ENST00000388940 A0A1W2PPI3 338 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 SLC17A3O00476 420 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 IGLV1-47P01700 117 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 CRYGCP07315 174 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 CRYGBP07316 175 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 PRRX1P54821 245 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 SUMO1P63165 101 aaKnown RBP12.03□□□□□ -0.48
SCFD2-201ENST00000388940 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
SCFD2-201ENST00000388940 FBXL19-AS1Q494R0 122 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 ETFRF1Q6IPR1 90 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 RITA1Q96K30 269 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 BSNQ9UPA5 3926 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 APC2O95996 2303 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 ISLRO14498 428 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 EREGO14944 169 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 COX7A2P2O60397 106 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 RBP4P02753 201 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 ADMP35318 185 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 MORN5Q5VZ52 161 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 C10orf113Q5VZT2 155 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 MMD2Q8IY49 270 aa12.03□□□□□ -0.48
SCFD2-201ENST00000388940 TRBV9A0A0B4J1U6 114 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 IGHV2-26A0A0B4J1V2 119 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 IGLC7A0M8Q6 106 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 IGLV2-8P01709 118 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 PAX2Q02962 417 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 OR5I1Q13606 314 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 PATE2Q6UY27 113 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 ZNF841Q6ZN19 808 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 OR5AU1Q8NGC0 362 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 IGF2BP2-AS1Q96M15 143 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 ATG101Q9BSB4 218 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 TPSG1Q9NRR2 321 aa12.02□□□□□ -0.48
SCFD2-201ENST00000388940 TRAV5A0A0B4J249 113 aa12.02□□□□□ -0.49
SCFD2-201ENST00000388940 M0R143 59 aa12.02□□□□□ -0.49
SCFD2-201ENST00000388940 ENSAO43768 121 aaKnown RBP12.02□□□□□ -0.49
SCFD2-201ENST00000388940 UBE2L3P68036 154 aaKnown RBP12.02□□□□□ -0.49
SCFD2-201ENST00000388940 MRPL52Q86TS9 123 aaKnown RBP12.02□□□□□ -0.49
SCFD2-201ENST00000388940 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
SCFD2-201ENST00000388940 ZNF355PQ9NSJ1 428 aa12.02□□□□□ -0.49
SCFD2-201ENST00000388940 PLAUP00749 431 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 RPL19P84098 196 aaKnown RBP12.01□□□□□ -0.49
SCFD2-201ENST00000388940 ZNF664Q8N3J9 261 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 PAXXQ9BUH6 204 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 CDC42EP3Q9UKI2 254 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 LAMA5O15230 3695 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 MUC6Q6W4X9 2439 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 MAP1BP46821 2468 aaKnown RBP12.01□□□□□ -0.49
SCFD2-201ENST00000388940 POLEQ07864 2286 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 M0QZK8 103 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 FAM87AP0C7U9 286 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 COX19Q49B96 90 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 C8orf46Q8TAG6 207 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 TRGV9Q99603 122 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms