RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PATJQ8NI35 1801 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 SNAI2O43623 268 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 IGHV3-11P01762 117 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 GNG5P63218 68 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 ZNF600Q6ZNG1 722 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 ST6GALNAC6Q969X2 333 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 SPRR3Q9UBC9 169 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 TGFAP01135 160 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 PLAURQ03405 335 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 EFNB3Q15768 340 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 CACNA1GO43497 2377 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 ARHGEF17Q96PE2 2063 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-202ENST00000380518 OR9G9P0C7N8 305 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 MYOD1P15172 320 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 CDKN1AP38936 164 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 EMP1P54849 157 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 H3BRM9 83 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 ZCCHC24Q8N2G6 241 aaKnown RBP13.34□□□□□ -0.27
COL2A1-202ENST00000380518 NABP1Q96AH0 204 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 JKAMPQ9P055 326 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 ROS1P08922 2347 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 PYYP10082 97 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
COL2A1-202ENST00000380518 TNFRSF14Q92956 283 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 WFDC1Q9HC57 220 aa13.34□□□□□ -0.27
COL2A1-202ENST00000380518 DOCK4Q8N1I0 1966 aa13.33□□□□□ -0.27
COL2A1-202ENST00000380518 TMEM50AO95807 157 aa13.33□□□□□ -0.28
COL2A1-202ENST00000380518 TFF1P04155 84 aa13.33□□□□□ -0.28
COL2A1-202ENST00000380518 ST6GALNAC3Q8NDV1 305 aa13.33□□□□□ -0.28
COL2A1-202ENST00000380518 SMAD7O15105 426 aaKnown RBP13.33□□□□□ -0.28
COL2A1-202ENST00000380518 FAM71F2Q6NXP2 309 aa13.33□□□□□ -0.28
COL2A1-202ENST00000380518 SRRM5B3KS81 715 aa13.33□□□□□ -0.28
COL2A1-202ENST00000380518 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
COL2A1-202ENST00000380518 GGNQ86UU5 652 aa13.33□□□□□ -0.28
COL2A1-202ENST00000380518 OCC1Q8TAD7 63 aa13.33□□□□□ -0.28
COL2A1-202ENST00000380518 RPUSD1Q9UJJ7 312 aaKnown RBP13.33□□□□□ -0.28
COL2A1-202ENST00000380518 DICER1Q9UPY3 1922 aaKnown RBP13.32□□□□□ -0.28
COL2A1-202ENST00000380518 LOC105371267A0A1B0GV96 52 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 C17orf82Q86X59 251 aaPredicted RBP13.32□□□□□ -0.28
COL2A1-202ENST00000380518 PSG8Q9UQ74 426 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 SIPA1L1O43166 1804 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 CYB5R2Q6BCY4 276 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 IGHV1-46P01743 117 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 ADMP35318 185 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 LDLRAD4O15165 306 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 SSBP4Q9BWG4 385 aaPredicted RBP13.32□□□□□ -0.28
COL2A1-202ENST00000380518 NPFFR1Q9GZQ6 430 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 RALGAPA2Q2PPJ7 1873 aa13.32□□□□□ -0.28
COL2A1-202ENST00000380518 E9PLN8 166 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 FOXG1P55316 489 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-202ENST00000380518 RHOGP84095 191 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 TEX38Q6PEX7 206 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 LINC01587Q99440 93 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 VKORC1Q9BQB6 163 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BKO60814 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 PPBPP02775 128 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BJP06899 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BOP23527 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BBP33778 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BDP58876 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BCP62807 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST2H2BEQ16778 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-202ENST00000380518 NIT1Q86X76 327 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BHQ93079 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BNQ99877 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 HIST1H2BMQ99879 126 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 PEMTQ9UBM1 199 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 FREM3P0C091 2139 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 COLCA1Q6ZS62 124 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 A0A1B0GWB2 263 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 LEPP41159 167 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 ZNF257Q9Y2Q1 563 aa13.31□□□□□ -0.28
COL2A1-202ENST00000380518 TIMM23O14925 209 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 CD5P06127 495 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 SUPT4H1P63272 117 aaKnown RBP13.3□□□□□ -0.28
COL2A1-202ENST00000380518 PRB3Q04118 309 aaPredicted RBP13.3□□□□□ -0.28
COL2A1-202ENST00000380518 MTURNQ8N3F0 131 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 LAMTOR2Q9Y2Q5 125 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 THBDP07204 575 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 OR10J3Q5JRS4 329 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 PGPEP1LA6NFU8 196 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 CD24P25063 80 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 FOXF2Q12947 444 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 TREML4Q6UXN2 200 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 PSME4Q14997 1843 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 NDUFAF3Q9BU61 184 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 GNB1LQ9BYB4 327 aa13.3□□□□□ -0.28
COL2A1-202ENST00000380518 MED12Q93074 2177 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 CHD5Q8TDI0 1954 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 LYNX1G3V0Z9 82 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 HBDP02042 147 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 LYNX1P0DP58 116 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 NUDT11Q96G61 164 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 NXT2Q9NPJ8 142 aaKnown RBP13.29□□□□□ -0.28
COL2A1-202ENST00000380518 TMEM242Q9NWH2 141 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 DOCK6Q96HP0 2047 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 TRAV21A0A0B4J279 112 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 APOMO95445 188 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 SPCS1Q9Y6A9 102 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms