RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SPP1P10451 314 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 MIFP14174 115 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 PI3P19957 117 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 P2RY1P47900 373 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 PPP5CP53041 499 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 UCP3P55916 312 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 TMEM41BQ5BJD5 291 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 ACTL10Q5JWF8 245 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 MORN3Q6PF18 240 aaPredicted RBP16.78■□□□□ 0.28
U2AF1-202ENST00000380276 IGHV4-4A0A075B6R2 117 aa16.77■□□□□ 0.28
U2AF1-202ENST00000380276 K7EQG2 157 aa16.77■□□□□ 0.28
U2AF1-202ENST00000380276 C4BPBP20851 252 aa16.77■□□□□ 0.28
U2AF1-202ENST00000380276 RNASE11Q8TAA1 199 aaKnown RBP16.77■□□□□ 0.28
U2AF1-202ENST00000380276 VPS13DQ5THJ4 4388 aa16.76■□□□□ 0.27
U2AF1-202ENST00000380276 IGKV1-5P01602 117 aa16.76■□□□□ 0.27
U2AF1-202ENST00000380276 ETV6P41212 452 aa16.76■□□□□ 0.27
U2AF1-202ENST00000380276 TRIM16LQ309B1 348 aa16.76■□□□□ 0.27
U2AF1-202ENST00000380276 KCTD21Q4G0X4 260 aa16.76■□□□□ 0.27
U2AF1-202ENST00000380276 SCPEP1Q9HB40 452 aa16.76■□□□□ 0.27
U2AF1-202ENST00000380276 MRPL36Q9P0J6 103 aaKnown RBP16.76■□□□□ 0.27
U2AF1-202ENST00000380276 HECTD4Q9Y4D8 3996 aa16.76■□□□□ 0.27
U2AF1-202ENST00000380276 CLN5O75503 358 aa16.75■□□□□ 0.27
U2AF1-202ENST00000380276 ATG12O94817 140 aa16.75■□□□□ 0.27
U2AF1-202ENST00000380276 GIG44P09565 113 aaPredicted RBP16.75■□□□□ 0.27
U2AF1-202ENST00000380276 RNASE2P10153 161 aaKnown RBP16.75■□□□□ 0.27
U2AF1-202ENST00000380276 MLANAQ16655 118 aa16.75■□□□□ 0.27
U2AF1-202ENST00000380276 GRAMD2BQ96HH9 432 aa16.75■□□□□ 0.27
U2AF1-202ENST00000380276 TP53RKQ96S44 253 aa16.75■□□□□ 0.27
U2AF1-202ENST00000380276 A0A0B4J293 547 aa16.74■□□□□ 0.27
U2AF1-202ENST00000380276 PIGPP57054 158 aa16.74■□□□□ 0.27
U2AF1-202ENST00000380276 TIGITQ495A1 244 aa16.74■□□□□ 0.27
U2AF1-202ENST00000380276 ZNF767PQ75MW2 155 aa16.74■□□□□ 0.27
U2AF1-202ENST00000380276 TBC1D24Q9ULP9 559 aa16.74■□□□□ 0.27
U2AF1-202ENST00000380276 ELOA3CA0A087WX78 387 aaPredicted RBP16.73■□□□□ 0.27
U2AF1-202ENST00000380276 CRYBB3P26998 211 aa16.73■□□□□ 0.27
U2AF1-202ENST00000380276 EIF2B2P49770 351 aaKnown RBP16.73■□□□□ 0.27
U2AF1-202ENST00000380276 RND3P61587 244 aa16.73■□□□□ 0.27
U2AF1-202ENST00000380276 DHRS2Q13268 280 aa16.73■□□□□ 0.27
U2AF1-202ENST00000380276 YIPF6Q96EC8 236 aa16.73■□□□□ 0.27
U2AF1-202ENST00000380276 RRNAD1Q96FB5 475 aaKnown RBP16.73■□□□□ 0.27
U2AF1-202ENST00000380276 FNDC4Q9H6D8 234 aaPredicted RBP16.73■□□□□ 0.27
U2AF1-202ENST00000380276 VCX3AQ9NNX9 186 aa16.73■□□□□ 0.27
U2AF1-202ENST00000380276 X6R8D5 127 aa16.73■□□□□ 0.27
U2AF1-202ENST00000380276 C3orf85A0A1B0GTC6 90 aa16.72■□□□□ 0.27
U2AF1-202ENST00000380276 ZNF705EA8MWA4 302 aaPredicted RBP16.72■□□□□ 0.27
U2AF1-202ENST00000380276 APOA1P02647 267 aa16.72■□□□□ 0.27
U2AF1-202ENST00000380276 RNASE10Q5GAN6 216 aaKnown RBP16.72■□□□□ 0.27
U2AF1-202ENST00000380276 PSMG4Q5JS54 123 aa16.72■□□□□ 0.27
U2AF1-202ENST00000380276 OR4X1Q8NH49 305 aa16.72■□□□□ 0.27
U2AF1-202ENST00000380276 ZNF486Q96H40 463 aaPredicted RBP16.72■□□□□ 0.27
U2AF1-202ENST00000380276 DNAH6Q9C0G6 4158 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 AGRNO00468 2067 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 FAM25AB3EWG3 89 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 FAM25CB3EWG5 89 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 FAM25GB3EWG6 89 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 INS-IGF2F8WCM5 200 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 HPGDSO60760 199 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 SP6Q3SY56 376 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 PVRIGQ6DKI7 326 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 LINC00336Q6ZUF6 198 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 COPZ2Q9P299 210 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 CELA1Q9UNI1 258 aa16.71■□□□□ 0.27
U2AF1-202ENST00000380276 DEFB131BA0A096LNP1 70 aa16.7■□□□□ 0.26
U2AF1-202ENST00000380276 RPS10-NUDT3A0A1W2PQS6 291 aa16.7■□□□□ 0.26
U2AF1-202ENST00000380276 DCANP1Q8TF63 244 aa16.7■□□□□ 0.26
U2AF1-202ENST00000380276 RNF126Q9BV68 326 aa16.7■□□□□ 0.26
U2AF1-202ENST00000380276 KIAA1109Q2LD37 5005 aa16.69■□□□□ 0.26
U2AF1-202ENST00000380276 TRAV30A0A087WSZ9 112 aa16.69■□□□□ 0.26
U2AF1-202ENST00000380276 HELTA6NFD8 242 aa16.69■□□□□ 0.26
U2AF1-202ENST00000380276 P0C879 139 aa16.69■□□□□ 0.26
U2AF1-202ENST00000380276 ELK1P19419 428 aa16.69■□□□□ 0.26
U2AF1-202ENST00000380276 DMRTA1Q5VZB9 504 aa16.69■□□□□ 0.26
U2AF1-202ENST00000380276 CCDC71LQ8N9Z2 235 aa16.69■□□□□ 0.26
U2AF1-202ENST00000380276 RAB40CQ96S21 281 aa16.69■□□□□ 0.26
U2AF1-202ENST00000380276 A0A0G2JRQ6 117 aa16.68■□□□□ 0.26
U2AF1-202ENST00000380276 HNRNPCP07910 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
U2AF1-202ENST00000380276 NCS1P62166 190 aa16.68■□□□□ 0.26
U2AF1-202ENST00000380276 Q8WTZ3 238 aa16.68■□□□□ 0.26
U2AF1-202ENST00000380276 KLK11Q9UBX7 282 aa16.68■□□□□ 0.26
U2AF1-202ENST00000380276 IGKV1-17P01599 117 aa16.67■□□□□ 0.26
U2AF1-202ENST00000380276 CD3DP04234 171 aa16.67■□□□□ 0.26
U2AF1-202ENST00000380276 RPL5P46777 297 aaKnown RBP16.67■□□□□ 0.26
U2AF1-202ENST00000380276 VBP1P61758 197 aa16.67■□□□□ 0.26
U2AF1-202ENST00000380276 SCGB2B2Q4G0G5 96 aa16.67■□□□□ 0.26
U2AF1-202ENST00000380276 PCLOQ9Y6V0 5065 aa16.67■□□□□ 0.26
U2AF1-202ENST00000380276 M0R2N4 97 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 RND2P52198 227 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 AP2S1P53680 142 aaPredicted RBP16.66■□□□□ 0.26
U2AF1-202ENST00000380276 NUTF2P61970 127 aaKnown RBP16.66■□□□□ 0.26
U2AF1-202ENST00000380276 C12orf74Q32Q52 190 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 LHFPL1Q86WI0 220 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 ARRDC1Q8N5I2 433 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 CSNK1G2-AS1Q8NCQ2 148 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 OR1S2Q8NGQ3 325 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 ZFAND1Q8TCF1 268 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 C1QTNF4Q9BXJ3 329 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 HEYLQ9NQ87 328 aaPredicted RBP16.66■□□□□ 0.26
U2AF1-202ENST00000380276 XCL2Q9UBD3 114 aa16.66■□□□□ 0.26
U2AF1-202ENST00000380276 A0A087WXM4 84 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 P0DMU3 169 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms