RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 ACY3Q96HD9 319 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 A8MWP6 167 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 GGTLC3B5MD39 225 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 SLC17A3O00476 420 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 TGOLN2O43493 480 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 OR5I1Q13606 314 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 ASPHD1Q5U4P2 390 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 DMRTA1Q5VZB9 504 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 TEX38Q6PEX7 206 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 LHFPL4Q7Z7J7 247 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 PDPNQ86YL7 162 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 FAM167A-AS1Q96KT0 104 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 A0A1W2PPI3 338 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 OR5G3P0C626 314 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 APELAP0DMC3 54 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 WASHC3Q9Y3C0 194 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 CD99P14209 185 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 USF1P22415 310 aaPredicted RBP10.76□□□□□ -0.69
CCDC3-202ENST00000378839 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 SGMS2Q8NHU3 365 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 TMEM133Q9H2Q1 129 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 ASH1LQ9NR48 2969 aaKnown RBP10.76□□□□□ -0.69
CCDC3-202ENST00000378839 PITPNC1Q9UKF7 332 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 ATRXP46100 2492 aa10.76□□□□□ -0.69
CCDC3-202ENST00000378839 A0A0U1RQK1 487 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 INS-IGF2F8WCM5 200 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 FSTL3O95633 263 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 CRYBB3P26998 211 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 LDLRAD2Q5SZI1 272 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 RAXQ9Y2V3 346 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 CD3EP07766 207 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 TMEM183AQ8IXX5 376 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 SLC35E1Q96K37 410 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 TXNDC17Q9BRA2 123 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 C2orf88Q9BSF0 95 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 SLC25A33Q9BSK2 321 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 ZFHX3Q15911 3703 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 MALRD1Q5VYJ5 2156 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 PPOXP50336 477 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 ETFRF1Q6IPR1 90 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 FAM71F2Q6NXP2 309 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 OR1P1Q8NH06 330 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 NPIPB3Q92617 1050 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 UHRF2Q96PU4 802 aa10.75□□□□□ -0.69
CCDC3-202ENST00000378839 ZNF320A2RRD8 509 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 B9A039 149 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 ENSAO43768 121 aaKnown RBP10.74□□□□□ -0.69
CCDC3-202ENST00000378839 IGLV1-47P01700 117 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 AREGP15514 252 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 FOXL1Q12952 345 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 EAF1Q96JC9 268 aaPredicted RBP10.74□□□□□ -0.69
CCDC3-202ENST00000378839 NDUFAF3Q9BU61 184 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 IGLC7A0M8Q6 106 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 C22orf46C9J442 243 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 COA6Q5JTJ3 125 aaKnown RBP10.74□□□□□ -0.69
CCDC3-202ENST00000378839 NGBQ9NPG2 151 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 GOLT1BQ9Y3E0 138 aa10.74□□□□□ -0.69
CCDC3-202ENST00000378839 NUPR1O60356 82 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 OR7C2O60412 319 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 CRYGBP07316 175 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 ERHP84090 104 aaKnown RBP10.73□□□□□ -0.69
CCDC3-202ENST00000378839 HCP5Q6MZN7 132 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 MUC15Q8N387 334 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 TCF21O43680 179 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 PYYP10082 97 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 CA7P43166 264 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 PDLIM4P50479 330 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 ADORA2A-AS1P86434 159 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 RBPJQ06330 500 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 SSX8Q7RTT4 187 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 PNKDQ8N490 385 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 OR4A5Q8NH83 315 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 LINC00479Q96M42 142 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 TECRQ9NZ01 308 aaKnown RBP10.73□□□□□ -0.69
CCDC3-202ENST00000378839 RALYQ9UKM9 306 aaKnown RBP10.73□□□□□ -0.69
CCDC3-202ENST00000378839 VSTM5A8MXK1 200 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 IGLV2-8P01709 118 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 SFTPCP11686 197 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 S100A7P31151 101 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 LCN2P80188 198 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 FBLN7Q53RD9 439 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 CENPWQ5EE01 88 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 OR10G8Q8NGN5 311 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 CACNG8Q8WXS5 425 aa10.73□□□□□ -0.69
CCDC3-202ENST00000378839 IGHV3-21A0A0B4J1V1 117 aa10.72□□□□□ -0.69
CCDC3-202ENST00000378839 MDFIC2A0A1B0GVS7 189 aa10.72□□□□□ -0.69
CCDC3-202ENST00000378839 ATP5IP56385 69 aaPredicted RBP10.72□□□□□ -0.69
CCDC3-202ENST00000378839 KCNIP4Q6PIL6 250 aa10.72□□□□□ -0.69
CCDC3-202ENST00000378839 IMMP2LQ96T52 175 aa10.72□□□□□ -0.69
CCDC3-202ENST00000378839 V9GYV3 84 aa10.72□□□□□ -0.69
CCDC3-202ENST00000378839 ARHGAP32A7KAX9 2087 aa10.72□□□□□ -0.69
CCDC3-202ENST00000378839 SUMO1P63165 101 aaKnown RBP10.72□□□□□ -0.69
CCDC3-202ENST00000378839 PQLC2Q6ZP29 291 aa10.72□□□□□ -0.69
CCDC3-202ENST00000378839 TMEM208Q9BTX3 173 aa10.72□□□□□ -0.69
CCDC3-202ENST00000378839 C9JCJ5 164 aa10.71□□□□□ -0.69
CCDC3-202ENST00000378839 CCL21O00585 134 aa10.71□□□□□ -0.69
CCDC3-202ENST00000378839 C8orf88P0DMB2 117 aa10.71□□□□□ -0.69
CCDC3-202ENST00000378839 RNASE7Q9H1E1 156 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms