RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 USF1P22415 310 aaPredicted RBP15.77■□□□□ 0.12
SHROOM1-202ENST00000378676 ERHP84090 104 aaKnown RBP15.77■□□□□ 0.12
SHROOM1-202ENST00000378676 CMTM2Q8TAZ6 248 aa15.77■□□□□ 0.12
SHROOM1-202ENST00000378676 TPSG1Q9NRR2 321 aa15.77■□□□□ 0.12
SHROOM1-202ENST00000378676 PIEZO2Q9H5I5 2752 aa15.77■□□□□ 0.11
SHROOM1-202ENST00000378676 F2Z2F3 143 aa15.77■□□□□ 0.11
SHROOM1-202ENST00000378676 TNFRSF13BO14836 293 aaPredicted RBP15.77■□□□□ 0.11
SHROOM1-202ENST00000378676 CYB5R2Q6BCY4 276 aa15.77■□□□□ 0.11
SHROOM1-202ENST00000378676 IGF2BP2-AS1Q96M15 143 aa15.77■□□□□ 0.11
SHROOM1-202ENST00000378676 C19orf24Q9BVV8 132 aa15.77■□□□□ 0.11
SHROOM1-202ENST00000378676 TMEM106BQ9NUM4 274 aa15.77■□□□□ 0.11
SHROOM1-202ENST00000378676 C1orf194Q5T5A4 169 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 ST6GALNAC3Q8NDV1 305 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 ST6GALNAC6Q969X2 333 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 ABHD17AQ96GS6 310 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 ZNF430Q9H8G1 570 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 MRPL36Q9P0J6 103 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 SNURFLB1AK76 121 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 INS-IGF2F8WCM5 200 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 DLEU1O43261 78 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 SPINK4O60575 86 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 SCGB1D1O95968 90 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 LOXP28300 417 aaPredicted RBP15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 UBE2L3P68036 154 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 PDPNQ86YL7 162 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 Q8NA96 180 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 OR4C13Q8NGP0 309 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 CACNG8Q8WXS5 425 aa15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 MRPL32Q9BYC8 188 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-202ENST00000378676 KIR2DL5BA0A0G2JN68 375 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 KIR2DL5BA0A0G2JPC4 375 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 A0A1W2PRE2 83 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 FCN1O00602 326 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 NDUFB3O43676 98 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 PYYP10082 97 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 DLX6P56179 175 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 KIR2DL5AQ8N109 375 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 OR5AU1Q8NGC0 362 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 RITA1Q96K30 269 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 MS4A10Q96PG2 267 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 GOLT1BQ9Y3E0 138 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 ADGRG4Q8IZF6 3080 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 IGKV1D-37A0A075B6S9 117 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 SERF1AO75920 110 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 CRISP2P16562 243 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 TIGITQ495A1 244 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 ASPHD1Q5U4P2 390 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 ZNF596Q8TC21 504 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 JKAMPQ9P055 326 aa15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 POLR3KQ9Y2Y1 108 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-202ENST00000378676 A0A1W2PN81 502 aa15.74■□□□□ 0.11
SHROOM1-202ENST00000378676 REG1AP05451 166 aa15.74■□□□□ 0.11
SHROOM1-202ENST00000378676 CD33P20138 364 aa15.74■□□□□ 0.11
SHROOM1-202ENST00000378676 TCL1AP56279 114 aa15.74■□□□□ 0.11
SHROOM1-202ENST00000378676 LRRC10Q5BKY1 277 aa15.74■□□□□ 0.11
SHROOM1-202ENST00000378676 PATE2Q6UY27 113 aa15.74■□□□□ 0.11
SHROOM1-202ENST00000378676 LINC00311Q8N616 119 aa15.74■□□□□ 0.11
SHROOM1-202ENST00000378676 OSTCQ9NRP0 149 aa15.74■□□□□ 0.11
SHROOM1-202ENST00000378676 SLC25A17O43808 307 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 LINC00614P0C842 121 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 SLC35B1P78383 322 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 MRGPRG-AS1Q2M3A8 158 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 NHLRC2Q8NBF2 726 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 OR4A5Q8NH83 315 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 NPIPB3Q92617 1050 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 TMEM186Q96B77 213 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 DNAJC4Q9NNZ3 241 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 CBLN4Q9NTU7 201 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 NAGKQ9UJ70 344 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 WASHC3Q9Y3C0 194 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 APC2O95996 2303 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 PPOXP50336 477 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 RUSC1-AS1Q66K80 236 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 FAM71F2Q6NXP2 309 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 GFRALQ6UXV0 394 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 RNASE6Q93091 150 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 LINC00479Q96M42 142 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 ZNF355PQ9NSJ1 428 aa15.73■□□□□ 0.11
SHROOM1-202ENST00000378676 A0A1W2PPI3 338 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 COX7A2P2O60397 106 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 MGST1P10620 155 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 PRR30Q53SZ7 412 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 Q6ZWC4 215 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 VSTM2AQ8TAG5 236 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 TMEM208Q9BTX3 173 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 DCHS1Q96JQ0 3298 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 DMXL2Q8TDJ6 3036 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 CX3CL1P78423 397 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 SPTBN2O15020 2390 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 POLEQ07864 2286 aa15.72■□□□□ 0.11
SHROOM1-202ENST00000378676 IGHV3-72A0A0B4J1Y9 119 aa15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 TCRBV4S1A1TA0A5B7 111 aa15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 RPLP1P05386 114 aaKnown RBP15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 ESDP10768 282 aa15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 DLX1P56177 255 aa15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 TMEM155Q4W5P6 130 aa15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 C8orf31Q8N9H6 132 aa15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 GNB1LQ9BYB4 327 aa15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 MALRD1Q5VYJ5 2156 aa15.71■□□□□ 0.11
SHROOM1-202ENST00000378676 ISLRO14498 428 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms