RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 OR4X1Q8NH49 305 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 TERB2Q8NHR7 220 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 TMEM230Q96A57 120 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 ZNF414Q96IQ9 312 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 ZFAND3Q9H8U3 227 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 EXTL2Q9UBQ6 330 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 RABAC1Q9UI14 185 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 ALMS1Q8TCU4 4167 aa10.84□□□□□ -0.67
HDAC6-204ENST00000376643 IGHV3OR16-13A0A075B7E8 117 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 IGHV3-74A0A0B4J1X5 117 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 HELTA6NFD8 242 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 C11orf94C9JXX5 98 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 IGKV1-5P01602 117 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 IGHV3-48P01763 117 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 CD3DP04234 171 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 UCP1P25874 307 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 HTR2BP41595 481 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 AP2S1P53680 142 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-204ENST00000376643 DEFB131AP59861 70 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 SPCS3P61009 180 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 MEF2DQ14814 521 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 TMEM229BQ8NBD8 167 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 OR52E5Q8NH55 327 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 C2CD4CQ8TF44 421 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 TP53RKQ96S44 253 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 RABL2AQ9UBK7 228 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-204ENST00000376643 KLK11Q9UBX7 282 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 RABL2BQ9UNT1 228 aa10.83□□□□□ -0.68
HDAC6-204ENST00000376643 C14orf166Q9Y224 244 aaKnown RBP10.83□□□□□ -0.68
HDAC6-204ENST00000376643 A0A0B4J293 547 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 P0C879 139 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 RNASE2P10153 161 aaKnown RBP10.82□□□□□ -0.68
HDAC6-204ENST00000376643 SLC25A4P12235 298 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 PPP5CP53041 499 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 DHODHQ02127 395 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 SURF2Q15527 256 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-204ENST00000376643 SCGB2B2Q4G0G5 96 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 SPINK9Q5DT21 86 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 ETFRF1Q6IPR1 90 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 ABHD1Q96SE0 405 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 HRH4Q9H3N8 390 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-204ENST00000376643 FBXL17Q9UF56 701 aa10.82□□□□□ -0.68
HDAC6-204ENST00000376643 PIGBOS1A0A0B4J2F0 54 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 GABARAPO95166 117 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 RAB3DO95716 219 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 CD74P04233 296 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 MIFP14174 115 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 PI3P19957 117 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 CRYBB3P26998 211 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 ETV6P41212 452 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 STXBP6Q8NFX7 210 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 OR1S2Q8NGQ3 325 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 OR13C8Q8NGS7 320 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 OR52I2Q8NH67 350 aa10.81□□□□□ -0.68
HDAC6-204ENST00000376643 RNASEH2CQ8TDP1 164 aaKnown RBP10.81□□□□□ -0.68
HDAC6-204ENST00000376643 TEX13DA0A0J9YY54 714 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-204ENST00000376643 DISC1C4P0D8 188 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 GABARAPH6UMI1 98 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 GSTZ1O43708 216 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-204ENST00000376643 NUP62P37198 522 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-204ENST00000376643 P2RY1P47900 373 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
HDAC6-204ENST00000376643 ZNF124Q15973 351 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 IZUMO4Q1ZYL8 232 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 AARDQ4LEZ3 155 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 RNASE12Q5GAN4 147 aaKnown RBP10.8□□□□□ -0.68
HDAC6-204ENST00000376643 LEMD1Q68G75 181 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 STEAP1BQ6NZ63 245 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 Q8WTZ3 238 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 RBPMSQ93062 196 aaKnown RBP10.8□□□□□ -0.68
HDAC6-204ENST00000376643 TMEM222Q9H0R3 208 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 PFDN2Q9UHV9 154 aa10.8□□□□□ -0.68
HDAC6-204ENST00000376643 PLECQ15149 4684 aaKnown RBP10.8□□□□□ -0.68
HDAC6-204ENST00000376643 IGHV3-66A0A0C4DH42 116 aa10.79□□□□□ -0.68
HDAC6-204ENST00000376643 A0A1B0GU03 582 aa10.79□□□□□ -0.68
HDAC6-204ENST00000376643 K7EQG2 157 aa10.79□□□□□ -0.68
HDAC6-204ENST00000376643 CDS2O95674 445 aa10.79□□□□□ -0.68
HDAC6-204ENST00000376643 NANOS2P60321 138 aaKnown RBP10.79□□□□□ -0.68
HDAC6-204ENST00000376643 SNRPD3P62318 126 aaKnown RBP10.79□□□□□ -0.68
HDAC6-204ENST00000376643 BSXQ3C1V8 233 aa10.79□□□□□ -0.68
HDAC6-204ENST00000376643 SCGB3A2Q96PL1 93 aa10.79□□□□□ -0.68
HDAC6-204ENST00000376643 C1QTNF4Q9BXJ3 329 aa10.79□□□□□ -0.68
HDAC6-204ENST00000376643 SEPSECSQ9HD40 501 aaKnown RBP10.79□□□□□ -0.68
HDAC6-204ENST00000376643 HEYLQ9NQ87 328 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-204ENST00000376643 HYDINQ4G0P3 5121 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 RGS5O15539 181 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 APOHP02749 345 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-204ENST00000376643 HNRNPCP07910 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
HDAC6-204ENST00000376643 YPEL3P61236 119 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-204ENST00000376643 SP6Q3SY56 376 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 C2orf83Q53S99 150 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 GPR107Q5VW38 600 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 TRPT1Q86TN4 253 aaKnown RBP10.78□□□□□ -0.68
HDAC6-204ENST00000376643 SLC24A4Q8NFF2 622 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 MARCH1Q8TCQ1 289 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 PRRT1Q99946 306 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 NAA60Q9H7X0 242 aa10.78□□□□□ -0.68
HDAC6-204ENST00000376643 CEBPZOSA8MTT3 80 aa10.77□□□□□ -0.69
HDAC6-204ENST00000376643 OR5AC1P0C628 307 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms