RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 SUB1P53999 127 aaKnown RBP eCLIP10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 SUMO1P63165 101 aaKnown RBP10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 CX3CL1P78423 397 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 VMA21Q3ZAQ7 101 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 OR5AU1Q8NGC0 362 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 OR1L4Q8NGR5 311 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 GNB1LQ9BYB4 327 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 TPSG1Q9NRR2 321 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 SH3BGRL2Q9UJC5 107 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 CDC42EP3Q9UKI2 254 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 ROS1P08922 2347 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 GVINP1Q7Z2Y8 2422 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 ACACAQ13085 2346 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 TRAV5A0A0B4J249 113 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 TAS2R60P59551 318 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 PATE2Q6UY27 113 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 OR8I2Q8N0Y5 310 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 CMTM2Q8TAZ6 248 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 DYNLRB1Q9NP97 96 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 NGBQ9NPG2 151 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 ZNF355PQ9NSJ1 428 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 MRPL36Q9P0J6 103 aaKnown RBP10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 ARFGEF3Q5TH69 2177 aa10.11□□□□□ -0.79
TSPAN6-201ENST00000373020 IGLC7A0M8Q6 106 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 GRIFINA4D1Z8 144 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 ZNF705GA8MUZ8 300 aaPredicted RBP10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 SLC25A17O43808 307 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 COX7A2P2O60397 106 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 MT-ND6P03923 174 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 CRYGCP07315 174 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 FRMD6-AS1P0C7T7 363 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 LGALS7P47929 136 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 BPIFB3P59826 476 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 Q0VG73 95 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 NPIPB3Q92617 1050 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 TNFRSF14Q92956 283 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 TMEM133Q9H2Q1 129 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 SNURFLB1AK76 121 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 CRISP2P16562 243 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 IER3P46695 156 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 COX19Q49B96 90 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 C10orf113Q5VZT2 155 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 ST6GALNAC3Q8NDV1 305 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 BEND2Q8NDZ0 799 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 RITA1Q96K30 269 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 NDUFAF3Q9BU61 184 aa10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 RNASE7Q9H1E1 156 aaKnown RBP10.1□□□□□ -0.79
TSPAN6-201ENST00000373020 PKDREJQ9NTG1 2253 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 MAP1BP46821 2468 aaKnown RBP10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 ZFHX2Q9C0A1 2572 aaPredicted RBP10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 IGHV1-69-2A0A0G2JMI3 117 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 SMIM27A0A1W2PRY6 76 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 FCN1O00602 326 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 CRYGBP07316 175 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 PAFAH1B2P68402 229 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 PAX2Q02962 417 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 PRR30Q53SZ7 412 aaPredicted RBP10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 WDR73Q6P4I2 378 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 TEX45Q8NA69 505 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 FXYD5Q96DB9 178 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 ADGRG4Q8IZF6 3080 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 KIR2DL5BA0A0G2JN68 375 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 KIR2DL5BA0A0G2JPC4 375 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 IGLV1-47P01700 117 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 PYYP10082 97 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 MYCNOSP40205 109 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 TBR1Q16650 682 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 IBA57Q5T440 356 aaKnown RBP10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 TMEM136Q6ZRR5 245 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 ZNF329Q86UD4 541 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 KIR2DL5AQ8N109 375 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 MS4A10Q96PG2 267 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 PAXXQ9BUH6 204 aa10.09□□□□□ -0.79
TSPAN6-201ENST00000373020 APC2O95996 2303 aa10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 PCNX1Q96RV3 2341 aa10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 C22orf46C9J442 243 aa10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 SERF1AO75920 110 aa10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 APOBEC3AP31941 199 aaPredicted RBP10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 RPL19P84098 196 aaKnown RBP10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 FXYD3Q14802 87 aa10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 FAM231DQ6ZW35 169 aa10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 NAGKQ9UJ70 344 aa10.08□□□□□ -0.8
TSPAN6-201ENST00000373020 B9A039 149 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 MFAP2P55001 183 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 TPPP2P59282 170 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 RANP62826 216 aaKnown RBP10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 SPACA3Q8IXA5 215 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 MBD6Q96DN6 1003 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 POLR3KQ9Y2Y1 108 aaPredicted RBP10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 IGHV2-26A0A0B4J1V2 119 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 PEX7O00628 323 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 LBHQ53QV2 105 aaPredicted RBP10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 ETFRF1Q6IPR1 90 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 Q6ZWC4 215 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 TRGV9Q99603 122 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 VKORC1Q9BQB6 163 aa10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 AMMECR1Q9Y4X0 333 aaPredicted RBP10.07□□□□□ -0.8
TSPAN6-201ENST00000373020 KALRNO60229 2985 aa10.06□□□□□ -0.8
TSPAN6-201ENST00000373020 IGHV3-48P01763 117 aa10.06□□□□□ -0.8
TSPAN6-201ENST00000373020 AMY1AP04745 511 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms