RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SLC45A2Q9UMX9 530 aa20.76■□□□□ 0.91
ATPAF1-202ENST00000371937 OR10J1P30954 320 aa20.75■□□□□ 0.91
ATPAF1-202ENST00000371937 STPG3Q8N7X2 389 aa20.75■□□□□ 0.91
ATPAF1-202ENST00000371937 TMEM116Q8NCL8 245 aa20.75■□□□□ 0.91
ATPAF1-202ENST00000371937 ACTR3CQ9C0K3 210 aaPredicted RBP20.75■□□□□ 0.91
ATPAF1-202ENST00000371937 ANKRD34BA5PLL1 514 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 AMY1AP04745 511 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 RND2P52198 227 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 PRR20EP86478 221 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 PRR20CP86479 221 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 PRR20DP86480 221 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 PRR20BP86481 221 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 PRR20AP86496 221 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 ZNF726P1Q15940 193 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 SPSB3Q6PJ21 355 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 THAP8Q8NA92 274 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 SLC39A9Q9NUM3 307 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 MDFIC2A0A1B0GVS7 189 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 IGHV3-48P01763 117 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 TMUB1Q9BVT8 246 aa20.74■□□□□ 0.91
ATPAF1-202ENST00000371937 TEX15Q9BXT5 2789 aa20.73■□□□□ 0.91
ATPAF1-202ENST00000371937 I3L2K1 104 aa20.73■□□□□ 0.91
ATPAF1-202ENST00000371937 ATP6V0E1O15342 81 aa20.73■□□□□ 0.91
ATPAF1-202ENST00000371937 YIF1AO95070 293 aa20.73■□□□□ 0.91
ATPAF1-202ENST00000371937 CTXND1A0A1B0GTU2 59 aa20.72■□□□□ 0.91
ATPAF1-202ENST00000371937 A0A1B0GV50 99 aa20.72■□□□□ 0.91
ATPAF1-202ENST00000371937 BPIFCQ8NFQ6 507 aa20.72■□□□□ 0.91
ATPAF1-202ENST00000371937 OR5R1Q8NH85 324 aa20.72■□□□□ 0.91
ATPAF1-202ENST00000371937 THYN1Q9P016 225 aa20.72■□□□□ 0.91
ATPAF1-202ENST00000371937 MRPL36Q9P0J6 103 aaKnown RBP20.72■□□□□ 0.91
ATPAF1-202ENST00000371937 ZFP92A6NM28 416 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 AKIRIN2Q53H80 203 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 UNQ5815/PRO19632Q6UWF5 114 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 LCN15Q6UWW0 184 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 CYP2G1PQ6ZSU1 146 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 IGLV11-55A0A075B6I3 123 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 MAP1LC3B2A6NCE7 125 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 LINC00869P0C866 280 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 IER3P46695 156 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 SELENOTP62341 195 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 FAM122CQ6P4D5 195 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 OR5T1Q8NG75 326 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 FAM110DQ8TAY7 271 aaPredicted RBP20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 FAM210AQ96ND0 272 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 PBDC1Q9BVG4 233 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 MAP1LC3BQ9GZQ8 125 aa20.71■□□□□ 0.91
ATPAF1-202ENST00000371937 A0A1W2PPV4 95 aa20.7■□□□□ 0.9
ATPAF1-202ENST00000371937 TCRBV4S1A1TA0A5B7 111 aa20.7■□□□□ 0.9
ATPAF1-202ENST00000371937 SH2D7A6NKC9 451 aaPredicted RBP20.7■□□□□ 0.9
ATPAF1-202ENST00000371937 SEC14L6B5MCN3 397 aa20.7■□□□□ 0.9
ATPAF1-202ENST00000371937 FANCD2OSQ96PS1 177 aa20.7■□□□□ 0.9
ATPAF1-202ENST00000371937 SLC25A22Q9H936 323 aa20.7■□□□□ 0.9
ATPAF1-202ENST00000371937 IGHV3-21A0A0B4J1V1 117 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 K7EIM0 57 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 IGHV4-59P01825 116 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 CDC34P49427 236 aaPredicted RBP20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 ECSCRQ19T08 205 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 GCSAMLQ5JQS6 135 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 TOR2AQ5JU69 321 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 SSX7Q7RTT5 188 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 OR4X1Q8NH49 305 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 RAB24Q969Q5 203 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 KRBOX1C9JBD0 128 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 HIST1H1BP16401 226 aaKnown RBP20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 CCL20P78556 96 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 TRGV9Q99603 122 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 TNFRSF19Q9NS68 423 aa20.69■□□□□ 0.9
ATPAF1-202ENST00000371937 FLNAP21333 2647 aaKnown RBP20.68■□□□□ 0.9
ATPAF1-202ENST00000371937 IGKV1D-37A0A075B6S9 117 aa20.68■□□□□ 0.9
ATPAF1-202ENST00000371937 LINC01548A6NM66 108 aa20.68■□□□□ 0.9
ATPAF1-202ENST00000371937 Q6YL49 198 aa20.68■□□□□ 0.9
ATPAF1-202ENST00000371937 C19orf24Q9BVV8 132 aa20.68■□□□□ 0.9
ATPAF1-202ENST00000371937 CRIP2P52943 208 aaPredicted RBP20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 GUK1Q16774 197 aa20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 C9orf152Q5JTZ5 239 aa20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 EIF5A2Q9GZV4 153 aaKnown RBP20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 PRDM13Q9H4Q3 707 aa20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 TREM1Q9NP99 234 aa20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 CD5LO43866 347 aa20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 SRSF3P84103 164 aaKnown RBP20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 PEA15Q15121 130 aa20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 NARS2Q96I59 477 aaKnown RBP20.67■□□□□ 0.9
ATPAF1-202ENST00000371937 IGHG2P01859 326 aa20.66■□□□□ 0.9
ATPAF1-202ENST00000371937 CD5P06127 495 aa20.66■□□□□ 0.9
ATPAF1-202ENST00000371937 GATA2P23769 480 aaPredicted RBP20.66■□□□□ 0.9
ATPAF1-202ENST00000371937 FGF8P55075 233 aaPredicted RBP20.66■□□□□ 0.9
ATPAF1-202ENST00000371937 RHOBP62745 196 aa20.66■□□□□ 0.9
ATPAF1-202ENST00000371937 KLK9Q2XQG4 91 aa20.66■□□□□ 0.9
ATPAF1-202ENST00000371937 SPNS3Q6ZMD2 512 aa20.66■□□□□ 0.9
ATPAF1-202ENST00000371937 KLK9Q9UKQ9 250 aa20.66■□□□□ 0.9
ATPAF1-202ENST00000371937 ZNF90Q03938 601 aa20.65■□□□□ 0.9
ATPAF1-202ENST00000371937 SLC35E3Q7Z769 313 aa20.65■□□□□ 0.9
ATPAF1-202ENST00000371937 TRAV41A0A0B4J266 112 aa20.64■□□□□ 0.9
ATPAF1-202ENST00000371937 IGF1P05019 195 aa20.64■□□□□ 0.9
ATPAF1-202ENST00000371937 ZP3P21754 424 aa20.64■□□□□ 0.9
ATPAF1-202ENST00000371937 TMEM231Q9H6L2 316 aa20.64■□□□□ 0.9
ATPAF1-202ENST00000371937 RBFOX3A6NFN3 312 aa20.64■□□□□ 0.89
ATPAF1-202ENST00000371937 G3V318 75 aa20.64■□□□□ 0.89
ATPAF1-202ENST00000371937 CLN5O75503 358 aa20.64■□□□□ 0.89
ATPAF1-202ENST00000371937 NPBWR1P48145 328 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms