RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CSTL1Q9H114 145 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 DOCK9Q9BZ29 2069 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 LOC105371242A0A075B767 164 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 HBBP68871 147 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 GATAD1Q8WUU5 269 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 H7C2G1 150 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 WDR82Q6UXN9 313 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 ZNF841Q6ZN19 808 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 SEPSECSQ9HD40 501 aaKnown RBP11.09□□□□□ -0.63
PTPRK-204ENST00000368210 J3KRW8 73 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 CRYBB3P26998 211 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 LHFPL1Q86WI0 220 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 C5orf63A6NC05 138 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 PCSK4Q6UW60 755 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 ZNF497Q6ZNH5 498 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 TCF23Q7RTU1 214 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 OR11H2Q8NH07 326 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 NHP2Q9NX24 153 aaKnown RBP11.09□□□□□ -0.63
PTPRK-204ENST00000368210 C17orf100A8MU93 164 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 ZNF479Q96JC4 524 aa11.09□□□□□ -0.63
PTPRK-204ENST00000368210 CA7P43166 264 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 RTN4RL2Q86UN3 420 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 IGKV1-27A0A075B6S5 117 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 MFAP4P55083 255 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 OR9G4Q8NGQ1 327 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 CACNA1BQ00975 2339 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 EGR1P18146 543 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 GCHFRP30047 84 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 KIR2DL2P43627 348 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-204ENST00000368210 WDR31Q8NA23 367 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 GNB1LQ9BYB4 327 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 RABAC1Q9UI14 185 aa11.08□□□□□ -0.64
PTPRK-204ENST00000368210 CKS2P33552 79 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 FCGR2BP31994 310 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-204ENST00000368210 CENPWQ5EE01 88 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 TMEM256Q8N2U0 113 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 ZNF525Q8N782 197 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 SH2D7A6NKC9 451 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-204ENST00000368210 RRHO14718 337 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 IL6RP08887 468 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-204ENST00000368210 HOXA4Q00056 320 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-204ENST00000368210 FOXA3P55318 350 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-204ENST00000368210 LOXL3P58215 753 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 ID3Q02535 119 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 RNF144BQ7Z419 303 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 LINC00312Q9Y6C7 94 aa11.07□□□□□ -0.64
PTPRK-204ENST00000368210 TFF3Q07654 80 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 FOXF2Q12947 444 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 ADIPOQQ15848 244 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 PEAR1Q5VY43 1037 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-204ENST00000368210 ASCL4Q6XD76 172 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 MRPL32Q9BYC8 188 aaKnown RBP11.06□□□□□ -0.64
PTPRK-204ENST00000368210 PLXNA4Q9HCM2 1894 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 IGHV1-18A0A0C4DH31 117 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 TMEM50AO95807 157 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 CCL20P78556 96 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 PGLYRP4Q96LB8 373 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 A8MWV9 139 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 YPEL1O60688 119 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 CEACAM8P31997 349 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-204ENST00000368210 B3GALT5-AS1P59052 145 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 SUPT4H1P63272 117 aaKnown RBP11.06□□□□□ -0.64
PTPRK-204ENST00000368210 FOXL1Q12952 345 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 LRTM2Q8N967 370 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 YPEL2Q96QA6 119 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 E9PQ18 207 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 AREGP15514 252 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 IFI27L2Q9H2X8 130 aa11.06□□□□□ -0.64
PTPRK-204ENST00000368210 TRAV8-6A0A0B4J262 113 aa11.05□□□□□ -0.64
PTPRK-204ENST00000368210 IL18BPO95998 194 aa11.05□□□□□ -0.64
PTPRK-204ENST00000368210 PF4V1P10720 104 aa11.05□□□□□ -0.64
PTPRK-204ENST00000368210 TFF1P04155 84 aa11.05□□□□□ -0.64
PTPRK-204ENST00000368210 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
PTPRK-204ENST00000368210 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-204ENST00000368210 K7EP13 123 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 WFDC3Q8IUB2 231 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 DPM3Q9P2X0 92 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 DOPEY2Q9Y3R5 2298 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 MUC21A0A0G2JKD1 596 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 MUC21A0A140T8X8 626 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 NPIPB11E5RHQ5 1161 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 H3BTX0 84 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 MOSP00540 346 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 QRFPP83859 136 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 MORN2Q502X0 79 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 MUC21Q5SSG8 566 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 TCF24Q7RTU0 167 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 MRPL20Q9BYC9 149 aaKnown RBP11.04□□□□□ -0.64
PTPRK-204ENST00000368210 IZUMO1RA6ND01 250 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 CCL3L1P16619 93 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 TMEM78Q5T7P6 136 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 TMEM42Q69YG0 159 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms