RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 BAALC-AS2P0C853 105 aa-0.08□□□□□ -2.42
RNU4-28P-201ENST00000364739 UCHL3P15374 230 aa-0.08□□□□□ -2.42
RNU4-28P-201ENST00000364739 HBA1P69905 142 aa-0.08□□□□□ -2.42
RNU4-28P-201ENST00000364739 PLEKHG7Q6ZR37 379 aa-0.08□□□□□ -2.42
RNU4-28P-201ENST00000364739 SBF1O95248 1867 aa-0.08□□□□□ -2.42
RNU4-28P-201ENST00000364739 ABCC11Q96J66 1382 aa-0.08□□□□□ -2.42
RNU4-28P-201ENST00000364739 A0A0D9SG42 100 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 CCL25O15444 150 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 C8orf88P0DMB2 117 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 COX6A1P12074 109 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 CLEC6AQ6EIG7 209 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 SFXN4Q6P4A7 337 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 GKN2Q86XP6 184 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 CLECL1Q8IZS7 167 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 SIGLECL1Q8N7X8 197 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 C3orf56Q8N813 242 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 XPNPEP1Q9NQW7 623 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 ZDBF2Q9HCK1 2354 aa-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 MYO18AQ92614 2054 aaKnown RBP-0.09□□□□□ -2.42
RNU4-28P-201ENST00000364739 EVC2Q86UK5 1308 aa-0.1□□□□□ -2.42
RNU4-28P-201ENST00000364739 MYL12AP19105 171 aa-0.1□□□□□ -2.43
RNU4-28P-201ENST00000364739 PSG9Q00887 426 aa-0.1□□□□□ -2.43
RNU4-28P-201ENST00000364739 LRRN1Q6UXK5 716 aa-0.1□□□□□ -2.43
RNU4-28P-201ENST00000364739 ALKAL1Q6UXT8 129 aa-0.1□□□□□ -2.43
RNU4-28P-201ENST00000364739 TMEM156Q8N614 296 aa-0.1□□□□□ -2.43
RNU4-28P-201ENST00000364739 SPRR2GQ9BYE4 73 aa-0.1□□□□□ -2.43
RNU4-28P-201ENST00000364739 M0QZ92 97 aa-0.11□□□□□ -2.43
RNU4-28P-201ENST00000364739 OR11H6Q8NGC7 330 aa-0.11□□□□□ -2.43
RNU4-28P-201ENST00000364739 OR13C4Q8NGS5 318 aa-0.11□□□□□ -2.43
RNU4-28P-201ENST00000364739 PIGXQ8TBF5 258 aa-0.11□□□□□ -2.43
RNU4-28P-201ENST00000364739 RAB8BQ92930 207 aa-0.11□□□□□ -2.43
RNU4-28P-201ENST00000364739 TLNRD1Q9H1K6 362 aa-0.11□□□□□ -2.43
RNU4-28P-201ENST00000364739 C11orf68Q9H3H3 251 aaKnown RBP-0.11□□□□□ -2.43
RNU4-28P-201ENST00000364739 PLAC8Q9NZF1 115 aa-0.11□□□□□ -2.43
RNU4-28P-201ENST00000364739 MYH10P35580 1976 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 PHRF1Q9P1Y6 1649 aaKnown RBP-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 NEBP20929 6669 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 OR2T8A6NH00 312 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 H0Y980 276 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 BUB1B-PAK6H3BSN5 160 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 PMAIP1Q13794 54 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 HIST3H2BBQ8N257 126 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 OR52R1Q8NGF1 315 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 OR10J5Q8NHC4 309 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 H1FXQ92522 213 aaKnown RBP-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 MIXL1Q9H2W2 232 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 FBXL12Q9NXK8 326 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 ERGIC3Q9Y282 383 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 UNC13CQ8NB66 2214 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 PLXNA4Q9HCM2 1894 aa-0.12□□□□□ -2.43
RNU4-28P-201ENST00000364739 MEGF8Q7Z7M0 2845 aa-0.13□□□□□ -2.43
RNU4-28P-201ENST00000364739 KLF7O75840 302 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-28P-201ENST00000364739 LRRC25Q8N386 305 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-28P-201ENST00000364739 GPR146Q96CH1 333 aa-0.13□□□□□ -2.43
RNU4-28P-201ENST00000364739 SLC39A9Q9NUM3 307 aa-0.13□□□□□ -2.43
RNU4-28P-201ENST00000364739 HECW2Q9P2P5 1572 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 MYH7BA7E2Y1 1941 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 DPRXA6NFQ7 191 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 PROSCO94903 275 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 APOEP02649 317 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 TCL1AP56279 114 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 DEFA1P59665 94 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 CDC42P60953 191 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 OR51V1Q9H2C8 321 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 FGFR1OP2Q9NVK5 253 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 EPDR1Q9UM22 224 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 MUC4Q99102 2169 aa-0.14□□□□□ -2.43
RNU4-28P-201ENST00000364739 A0A1B0GV50 99 aa-0.15□□□□□ -2.43
RNU4-28P-201ENST00000364739 LINC00854A0A1B0GVQ3 168 aa-0.15□□□□□ -2.43
RNU4-28P-201ENST00000364739 EEF1E1-BLOC1S5C9J1V9 151 aa-0.15□□□□□ -2.43
RNU4-28P-201ENST00000364739 OR2B3O76000 313 aa-0.15□□□□□ -2.43
RNU4-28P-201ENST00000364739 MED21Q13503 144 aa-0.15□□□□□ -2.43
RNU4-28P-201ENST00000364739 FANCMQ8IYD8 2048 aa-0.16□□□□□ -2.43
RNU4-28P-201ENST00000364739 PIK3R4Q99570 1358 aa-0.16□□□□□ -2.43
RNU4-28P-201ENST00000364739 RAB5BP61020 215 aa-0.16□□□□□ -2.44
RNU4-28P-201ENST00000364739 FAM74A1Q5RGS3 127 aa-0.16□□□□□ -2.44
RNU4-28P-201ENST00000364739 LINC00322Q6ZN03 302 aaPredicted RBP-0.16□□□□□ -2.44
RNU4-28P-201ENST00000364739 OR13D1Q8NGV5 346 aa-0.16□□□□□ -2.44
RNU4-28P-201ENST00000364739 HS3ST2Q9Y278 367 aa-0.16□□□□□ -2.44
RNU4-28P-201ENST00000364739 M0R378 163 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 HLA-DRB1P01911 266 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 MAGEA2P43356 314 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 SPINK9Q5DT21 86 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 FAM9CQ8IZT9 166 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 TSKUQ8WUA8 353 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 TOMM6Q96B49 74 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 ATP6V1G3Q96LB4 118 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 SLC35A3Q9Y2D2 325 aa-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 V9GYY5 206 aaPredicted RBP-0.17□□□□□ -2.44
RNU4-28P-201ENST00000364739 TRAV9-1A0A075B6T8 112 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 EXOC1LA0A1B0GW35 172 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 TRBV6-4A0A1B0GX49 114 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 FAAHO00519 579 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 KRTAP26-1Q6PEX3 210 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 GRINAQ7Z429 371 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 LINC00301Q8NCQ3 95 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 NIPSNAP1Q9BPW8 284 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 OSTCQ9NRP0 149 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 TMEM14CQ9P0S9 112 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms