RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ETFRF1Q6IPR1 90 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 ZNF343Q6P1L6 599 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 ZNF502Q8TBZ5 544 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 GNB4Q9HAV0 340 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 TRBV7-1A0A0A6YYK4 115 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 IGHV3-21A0A0B4J1V1 117 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 ADARB2-AS1A8MUL3 147 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 CST7O76096 145 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 SCAF4O95104 1147 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 IGHV3-11P01762 117 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 RPL12P30050 165 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 FCGR2BP31994 310 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 RUNX1Q01196 453 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 HIST2H2BDQ6DRA6 164 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 OR8G2PQ6IF36 304 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 C18orf65Q6ZTR6 163 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 ZNF546Q86UE3 836 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 EEF1AKMT3Q96AZ1 226 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 ATP6V0BQ99437 205 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 TXN2Q99757 166 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 C21orf62Q9NYP8 219 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 S4R3C0 116 aa9.6□□□□□ -0.87
NIF3L1-201ENST00000359683 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 F8W735 103 aaPredicted RBP9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 I3L521 148 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 IGHV3-48P01763 117 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 MFAP4P55083 255 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 EWSR1Q01844 656 aaKnown RBP eCLIP9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 NHLH2Q02577 135 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 BAXQ07812 192 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 CD300CQ08708 224 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 FAM209BQ5JX69 171 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 SLC16A13Q7RTY0 426 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 NDUFA11Q86Y39 141 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 STX12Q86Y82 276 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 TMEM116Q8NCL8 245 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 OR11H4Q8NGC9 324 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 CCDC140Q96MF4 163 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 AQP10Q96PS8 301 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 GGACTQ9BVM4 153 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 MRPL36Q9P0J6 103 aaKnown RBP9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 TNFSF18Q9UNG2 199 aa9.59□□□□□ -0.87
NIF3L1-201ENST00000359683 FXYD6-FXYD2A0A087WZ82 144 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 HMSDA8MTL9 139 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 LGALS1P09382 135 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 S100A11P31949 105 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 DLK1P80370 383 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 GAMTQ14353 236 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 KHDC1LQ5JSQ8 128 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 C3orf56Q8N813 242 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 OR4X1Q8NH49 305 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 C4orf3Q8WVX3 66 aa9.58□□□□□ -0.88
NIF3L1-201ENST00000359683 FNDC10F2Z333 226 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 C1QBP02746 253 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 CLEC3BP05452 202 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 NPBWR1P48145 328 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 HBG1P69891 147 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 HBG2P69892 147 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 ATP6V1FQ16864 119 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 ACSM6Q6P461 480 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 CLEC19AQ6UXS0 136 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 ACOT7LQ6ZUV0 252 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 TMEM217Q8N7C4 229 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 KLHL30-AS1Q8NEE0 82 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 BSCL2Q96G97 398 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 OR5B12Q96R08 314 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 GAR1Q9NY12 217 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 PEF1Q9UBV8 284 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 HSPB11Q9Y547 144 aa9.57□□□□□ -0.88
NIF3L1-201ENST00000359683 RNF222A6NCQ9 220 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 CLN5O75503 358 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 NUP62P37198 522 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 RND2P52198 227 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 SLC38A11Q08AI6 406 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 SHISA2Q6UWI4 295 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 INO80EQ8NBZ0 244 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 NPIPB3Q92617 1050 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 SLC35E1Q96K37 410 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 A0A1W2PRX2 142 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 ANKRD34BA5PLL1 514 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 NUDT19A8MXV4 375 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 TRBV12-3P01733 135 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 HSPB1P04792 205 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 CTSGP08311 255 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 VWC2Q2TAL6 325 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 NSUN5P1Q3KNT7 163 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 Q56UQ5 140 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 C8orf86Q6ZUL3 223 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 TMEM144Q7Z5S9 345 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 OR1S2Q8NGQ3 325 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 OR5C1Q8NGR4 320 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 NPVFQ9HCQ7 196 aa9.56□□□□□ -0.88
NIF3L1-201ENST00000359683 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
NIF3L1-201ENST00000359683 OR2T8A6NH00 312 aa9.55□□□□□ -0.88
NIF3L1-201ENST00000359683 LCE2BO14633 110 aa9.55□□□□□ -0.88
NIF3L1-201ENST00000359683 ARPC5O15511 151 aa9.55□□□□□ -0.88
NIF3L1-201ENST00000359683 TGOLN2O43493 480 aa9.55□□□□□ -0.88
NIF3L1-201ENST00000359683 GNG7O60262 68 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms