RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OR5P3Q8WZ94 311 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 ZNF71Q9NQZ8 489 aaPredicted RBP7.41□□□□□ -1.22
COL6A6-201ENST00000358511 SPINT1O43278 529 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 PSCAO43653 123 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 IGFBP2P18065 325 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 LOXL4Q96JB6 756 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 PROB1E7EW31 1015 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 TGFAP01135 160 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 LHBP01229 141 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 ZNF688P0C7X2 276 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 HOXD3P31249 432 aaPredicted RBP7.41□□□□□ -1.22
COL6A6-201ENST00000358511 MGST2Q99735 147 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 AGRNO00468 2067 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
COL6A6-201ENST00000358511 LINC01551Q86U37 167 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 PPBPP02775 128 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 REG1AP05451 166 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 NXPH1P58417 271 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 SNHG12Q9BXW3 62 aa7.41□□□□□ -1.22
COL6A6-201ENST00000358511 CLPSL1A2RUU4 121 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 C9JCJ5 164 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 TSKUQ8WUA8 353 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 GFI1Q99684 422 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 TRAV5A0A0B4J249 113 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 MUC21A0A0G2JKD1 596 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 MUC21A0A140T8X8 626 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 CGB1A6NKQ9 187 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 SYNGR3O43761 229 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 ZNF56Q15929 161 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 MUC21Q5SSG8 566 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 LHFPL4Q7Z7J7 247 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 MPV17L2Q567V2 206 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 LINC00114Q6XXX2 140 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 MOSP00540 346 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 COX5BP10606 129 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 LYL1P12980 280 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 ZNF576Q9H609 170 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 MRPL27Q9P0M9 148 aaKnown RBP7.4□□□□□ -1.22
COL6A6-201ENST00000358511 A0A0J9YW62 118 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 IGKCP01834 107 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 KIR3DS1Q14943 382 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 TMEM256Q8N2U0 113 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.4□□□□□ -1.22
COL6A6-201ENST00000358511 OCC1Q8TAD7 63 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 TMEM186Q96B77 213 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 DCTN5Q9BTE1 182 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 SMPXQ9UHP9 88 aa7.4□□□□□ -1.22
COL6A6-201ENST00000358511 A0A1B0GWJ7 208 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 GPX1P07203 203 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 SPINK8P0C7L1 97 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 GAS1P54826 345 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 C10orf91Q5T1B1 145 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 OR52E5Q8NH55 327 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 C2orf16Q68DN1 1984 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 IGHV4-39P01824 125 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 Q9H3A6 140 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 THSD7AQ9UPZ6 1657 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 A0A087X0K7 114 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 OR5AN1Q8NGI8 311 aa7.4□□□□□ -1.23
COL6A6-201ENST00000358511 ITGB1BP1O14713 200 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 ZIC3O60481 467 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 NPIPB3Q92617 1050 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 H3BRM9 83 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 PLNP26678 52 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 SUPT4H1P63272 117 aaKnown RBP7.39□□□□□ -1.23
COL6A6-201ENST00000358511 SLC25A53Q5H9E4 307 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 H3BTX0 84 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 PAX2Q02962 417 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 FAM71F2Q6NXP2 309 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 FER1L6-AS1Q8NA97 138 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 FOXI3A8MTJ6 420 aaPredicted RBP7.39□□□□□ -1.23
COL6A6-201ENST00000358511 TMEM92Q6UXU6 159 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 MIR17HGQ75NE6 70 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 FAM90A9PA6NNJ1 464 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 J3QW42 95 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 IFNL4K9M1U5 179 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 RAMP3O60896 148 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 Q6ZS52 159 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 SLC25A48Q6ZT89 311 aaKnown RBP7.39□□□□□ -1.23
COL6A6-201ENST00000358511 TMEM54Q969K7 222 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 NPSP0C0P6 89 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 SMIM10L1P0DMW3 83 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 FAM74A4Q5TZK3 123 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 SMIM10Q96HG1 83 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 IDI2-AS1Q9NZ38 188 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 POLR3KQ9Y2Y1 108 aaPredicted RBP7.39□□□□□ -1.23
COL6A6-201ENST00000358511 LOXL3P58215 753 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 DNASE2BQ8WZ79 361 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 IFI27L2Q9H2X8 130 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 C21orf140B9A014 251 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 GUSBP1Q15486 140 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 SUMO4Q6EEV6 95 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 CT55Q8WUE5 264 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 CRIM1Q9NZV1 1036 aa7.39□□□□□ -1.23
COL6A6-201ENST00000358511 IGHV5-10-1A0A0J9YXX1 117 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 H7C1H1 209 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 IGHV2-5P01817 119 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 CFHR5Q9BXR6 569 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms