RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ATRAIDQ6UW56 229 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 SLC25A28Q96A46 364 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 ATXN7O15265 892 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-202ENST00000357162 TMEM240Q5SV17 173 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 IFI27P40305 119 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-202ENST00000357162 TDGF1P3P51864 188 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 DMBT1Q9UGM3 2413 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-202ENST00000357162 MBNL2Q5VZF2 373 aaKnown RBP5.55□□□□□ -1.52
VPS13B-202ENST00000357162 MDP1Q86V88 176 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 TRBV20OR9-2A0A075B6H5 130 aa5.55□□□□□ -1.52
VPS13B-202ENST00000357162 CDKN1BP46527 198 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 LAGE3Q14657 143 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 HES7Q9BYE0 225 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF576Q9H609 170 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 RBMY1BA6NDE4 496 aaKnown RBP5.54□□□□□ -1.52
VPS13B-202ENST00000357162 RBMY1EA6NEQ0 496 aaKnown RBP5.54□□□□□ -1.52
VPS13B-202ENST00000357162 RBMY1DP0C7P1 496 aaKnown RBP5.54□□□□□ -1.52
VPS13B-202ENST00000357162 RBMY1A1P0DJD3 496 aaKnown RBP5.54□□□□□ -1.52
VPS13B-202ENST00000357162 RBMY1CP0DJD4 496 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 FER1L6-AS1Q8NA97 138 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 ZDHHC16Q969W1 377 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 IGLV3-19P01714 112 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 IL6RP08887 468 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-202ENST00000357162 GLRXP35754 106 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 C14orf144Q96I85 54 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 MT-CO3P00414 261 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 SPSB3Q6PJ21 355 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 KIR3DL3Q8N743 410 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 SCTP09683 121 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 GPX1P07203 203 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 NPPCP23582 126 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 CMC4P56277 68 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-202ENST00000357162 CCL7P80098 99 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 ACP7Q6ZNF0 438 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 R4GN57 208 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 TMEM86BQ8N661 226 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-202ENST00000357162 PGPA6NDG6 321 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 H3BUT2 72 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 IGHG4P01861 327 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 EDN3P14138 238 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 MRPL14Q6P1L8 145 aaKnown RBP5.54□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF497Q6ZNH5 498 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 KIR2DL5BA0A0G2JN68 375 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 KIR2DL5BA0A0G2JPC4 375 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 CNTFRP26992 372 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 PCSK4Q6UW60 755 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 GOLT1AQ6ZVE7 132 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 KIR2DL5AQ8N109 375 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF441Q8N8Z8 693 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 FABP5P3A8MUU1 101 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 CEACAM4O75871 244 aa5.54□□□□□ -1.52
VPS13B-202ENST00000357162 B9A039 149 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF137PP52743 207 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 PRSS8Q16651 343 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 OR10W1Q8NGF6 305 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 SYS1-DBNDD2H3BUS1 97 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 HOXA3O43365 443 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-202ENST00000357162 MESP2Q0VG99 397 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 R3HDMLQ9H3Y0 253 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 RRN3P1Q2M238 152 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 C1orf185Q5T7R7 199 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 RRHO14718 337 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 ATP5G1P05496 136 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 ATP5G3P48201 142 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 ATP5G2Q06055 141 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 LINC00305Q7Z4B0 112 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 SRSF12Q8WXF0 261 aaKnown RBP5.53□□□□□ -1.52
VPS13B-202ENST00000357162 SPXQ9BT56 116 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 IGKV1D-16P01601 117 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 REG1BP48304 166 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 WIPF2Q8TF74 440 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-202ENST00000357162 IGLV3-12A0A075B6K2 115 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 PPIHO43447 177 aaKnown RBP5.53□□□□□ -1.52
VPS13B-202ENST00000357162 TEX45Q8NA69 505 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 IDI2-AS1Q9NZ38 188 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 EFEMP2O95967 443 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF562Q6V9R5 426 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 LYPD6BQ8NI32 183 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 IFI27L1Q96BM0 104 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 TEX43Q6ZNM6 134 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 CCL17Q92583 94 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 MEGF9Q9H1U4 602 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 WFDC1Q9HC57 220 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 GGTLC3B5MD39 225 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 PPIAL4DF5H284 164 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 IGKCP01834 107 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 PRCDQ00LT1 54 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 FAM90A2PQ658T7 463 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 ATOH7Q8N100 152 aa5.53□□□□□ -1.52
VPS13B-202ENST00000357162 MAP1AP78559 2803 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-202ENST00000357162 TCRBV4S1A1TA0A5B7 111 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 PATE1Q8WXA2 126 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 TNS1Q9HBL0 1735 aaKnown RBP5.52□□□□□ -1.53
VPS13B-202ENST00000357162 CD300EQ496F6 205 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-202ENST00000357162 DEFB108BQ8NET1 73 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 ANAPC10Q9UM13 185 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 PPIAL4EA0A075B759 164 aa5.52□□□□□ -1.53
VPS13B-202ENST00000357162 IGKV3D-15A0A087WSY6 115 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms