RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CCL21O00585 134 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 HPRT1P00492 218 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 IGKV1-17P01599 117 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 IER3P46695 156 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 UBA52P62987 128 aaKnown RBP4.37□□□□□ -1.71
CD47-201ENST00000355354 DEFB113Q30KQ7 82 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 C9orf47Q6ZRZ4 202 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 OR5L2Q8NGL0 311 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 IGHV3OR16-10A0A075B7F0 116 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 OR2T8A6NH00 312 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 SERPINE3A8MV23 424 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.37□□□□□ -1.71
CD47-201ENST00000355354 CLDN34H7C241 214 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 ARG2P78540 354 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 OR4A47Q6IF82 309 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 DTX2Q86UW9 622 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 OR2V2Q96R30 315 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 A0A087X0K7 114 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 A0A1W2PPI3 338 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 BTBD17A6NE02 478 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 CBR3O75828 277 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 CA2P00918 260 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 GAPDHP04406 335 aaKnown RBP4.37□□□□□ -1.71
CD47-201ENST00000355354 CFHR2P36980 270 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PRR20EP86478 221 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PRR20CP86479 221 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PRR20DP86480 221 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PRR20BP86481 221 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PRR20AP86496 221 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 ZNF146Q15072 292 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PQLC2Q6ZP29 291 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 OR2Z1Q8NG97 314 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 SMIM7Q9BQ49 75 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PLEKHA2Q9HB19 425 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 A0A1W2PS18 150 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 NPIPB13A6NJU9 1138 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 NPIPB4C9JG80 1138 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 J3QW42 95 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 SNAPINO95295 136 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 BATFQ16520 125 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 ZNF506Q5JVG8 444 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 MOGAT3Q86VF5 341 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 OR2K2Q8NGT1 345 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 PP6455Q8WZ26 134 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 HSPB9Q9BQS6 159 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 KPTNQ9Y664 436 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 TMSB15BA0A087X1C1 80 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 FAM90A27PA6NNH2 459 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 LTAP01374 205 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 COX5AP20674 150 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 OR2V1Q8NHB1 315 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 NEU4Q8WWR8 484 aaPredicted RBP4.36□□□□□ -1.71
CD47-201ENST00000355354 THRSPQ92748 146 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 SAT2Q96F10 170 aaPredicted RBP4.36□□□□□ -1.71
CD47-201ENST00000355354 C19orf25Q9UFG5 118 aaPredicted RBP4.36□□□□□ -1.71
CD47-201ENST00000355354 NOSIPQ9Y314 301 aaKnown RBP4.36□□□□□ -1.71
CD47-201ENST00000355354 IGKV3D-15A0A087WSY6 115 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 CLPSL1A2RUU4 121 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 C1orf196B1AJZ1 125 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 F6UB75 175 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 BRS3P32247 399 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 TMEM95Q3KNT9 176 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 GBGT1Q8N5D6 347 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 OR4F5Q8NH21 305 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 NEK7Q8TDX7 302 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 FAM222BQ8WU58 562 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 A0A087WZY1 265 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 HYPMO75409 117 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 TPPPO94811 219 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 ELANEP08246 267 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 C4BPBP20851 252 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 DSCR4P56555 118 aaPredicted RBP4.36□□□□□ -1.71
CD47-201ENST00000355354 MRPS10P82664 201 aaKnown RBP4.36□□□□□ -1.71
CD47-201ENST00000355354 RNASE6Q93091 150 aaKnown RBP4.36□□□□□ -1.71
CD47-201ENST00000355354 GNPNAT1Q96EK6 184 aaPredicted RBP4.36□□□□□ -1.71
CD47-201ENST00000355354 PLSCR4Q9NRQ2 329 aa4.36□□□□□ -1.71
CD47-201ENST00000355354 TMEM213A2RRL7 107 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 HSPB2A8KAH6 182 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 MRPL33O75394 65 aaKnown RBP4.35□□□□□ -1.71
CD47-201ENST00000355354 HSPB2Q16082 182 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 C1orf185Q5T7R7 199 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 PRR27Q6MZM9 219 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 S100PBPQ96BU1 408 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 ZMAT5Q9UDW3 170 aaKnown RBP4.35□□□□□ -1.71
CD47-201ENST00000355354 CYB561P49447 251 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 CAMPP49913 170 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 ZNF718Q3SXZ3 478 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 MPV17L2Q567V2 206 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 TBX15Q96SF7 602 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 FAM173AQ9BQD7 235 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 NUDT16L1Q9BRJ7 211 aaKnown RBP4.35□□□□□ -1.71
CD47-201ENST00000355354 SMCO4Q9NRQ5 59 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 IGHV2OR16-5A0A0B4J2B6 119 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 CHEK1O14757 476 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 JTBO76095 146 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 ZFP36P26651 326 aaKnown RBP4.35□□□□□ -1.71
CD47-201ENST00000355354 SSR4P51571 173 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 FUT6P51993 359 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms