RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 OSR1Q8TAX0 266 aaPredicted RBP15.84■□□□□ 0.13
COL13A1-201ENST00000354547 TBX15Q96SF7 602 aa15.84■□□□□ 0.13
COL13A1-201ENST00000354547 FNDC4Q9H6D8 234 aaPredicted RBP15.84■□□□□ 0.13
COL13A1-201ENST00000354547 LINC00574Q9H8X3 128 aa15.84■□□□□ 0.13
COL13A1-201ENST00000354547 OR5G3P0C626 314 aa15.84■□□□□ 0.13
COL13A1-201ENST00000354547 HCP5Q6MZN7 132 aa15.84■□□□□ 0.13
COL13A1-201ENST00000354547 NDUFB3O43676 98 aa15.84■□□□□ 0.13
COL13A1-201ENST00000354547 THBDP07204 575 aa15.84■□□□□ 0.13
COL13A1-201ENST00000354547 DMRTC2Q8IXT2 367 aaPredicted RBP15.84■□□□□ 0.13
COL13A1-201ENST00000354547 NOL4LQ96MY1 436 aaPredicted RBP15.84■□□□□ 0.13
COL13A1-201ENST00000354547 HSPB9Q9BQS6 159 aa15.84■□□□□ 0.13
COL13A1-201ENST00000354547 SAMD10Q9BYL1 202 aa15.84■□□□□ 0.13
COL13A1-201ENST00000354547 ZNF430Q9H8G1 570 aaPredicted RBP15.84■□□□□ 0.13
COL13A1-201ENST00000354547 MRPL36Q9P0J6 103 aaKnown RBP15.84■□□□□ 0.13
COL13A1-201ENST00000354547 POLR3KQ9Y2Y1 108 aaPredicted RBP15.84■□□□□ 0.13
COL13A1-201ENST00000354547 ZZEF1O43149 2961 aa15.83■□□□□ 0.13
COL13A1-201ENST00000354547 DLL1O00548 723 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 COX7A2P2O60397 106 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 LINC00310P59036 64 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 PRR31Q5SQ13 230 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 TOMM20LQ6UXN7 152 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 NUP37Q8NFH4 326 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 NDUFAF3Q9BU61 184 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 DNAJC4Q9NNZ3 241 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 MALRD1Q5VYJ5 2156 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 TDRG1Q3Y452 100 aa15.83■□□□□ 0.12
COL13A1-201ENST00000354547 TMEM178BH3BS89 294 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 PRR27Q6MZM9 219 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 OR4C13Q8NGP0 309 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 SLC25A2Q9BXI2 301 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 ZNF355PQ9NSJ1 428 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 IBA57Q5T440 356 aaKnown RBP15.82■□□□□ 0.12
COL13A1-201ENST00000354547 GFRALQ6UXV0 394 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 Q6ZWC4 215 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 OR5AN1Q8NGI8 311 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 DYNLRB1Q9NP97 96 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 CTSZQ9UBR2 303 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 RPH3ALQ9UNE2 315 aa15.82■□□□□ 0.12
COL13A1-201ENST00000354547 FNDC10F2Z333 226 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 LRRC10Q5BKY1 277 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 FAM168AQ92567 244 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 TMEM106BQ9NUM4 274 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 EREGO14944 169 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 MOSP00540 346 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 CDKN1AP38936 164 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 RUSC1-AS1Q66K80 236 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 CGB1A6NKQ9 187 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 ORM2P19652 201 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 USF1P22415 310 aaPredicted RBP15.81■□□□□ 0.12
COL13A1-201ENST00000354547 TPPP2P59282 170 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 MEF2CQ06413 473 aaPredicted RBP15.81■□□□□ 0.12
COL13A1-201ENST00000354547 PRR30Q53SZ7 412 aaPredicted RBP15.81■□□□□ 0.12
COL13A1-201ENST00000354547 IGF2-ASQ6U949 168 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 BLNKQ8WV28 456 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 ATG101Q9BSB4 218 aa15.81■□□□□ 0.12
COL13A1-201ENST00000354547 C10orf113Q5VZT2 155 aa15.8■□□□□ 0.12
COL13A1-201ENST00000354547 TGIF2LXQ8IUE1 241 aa15.8■□□□□ 0.12
COL13A1-201ENST00000354547 FAM167A-AS1Q96KT0 104 aa15.8■□□□□ 0.12
COL13A1-201ENST00000354547 LYNX1G3V0Z9 82 aa15.8■□□□□ 0.12
COL13A1-201ENST00000354547 LYNX1P0DP58 116 aa15.8■□□□□ 0.12
COL13A1-201ENST00000354547 PAX1P15863 534 aa15.8■□□□□ 0.12
COL13A1-201ENST00000354547 GNB4Q9HAV0 340 aa15.8■□□□□ 0.12
COL13A1-201ENST00000354547 CSMD1Q96PZ7 3565 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 H3BTX0 84 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 RANP62826 216 aaKnown RBP15.79■□□□□ 0.12
COL13A1-201ENST00000354547 TMEM177Q53S58 311 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 VN1R17PQ8TDU5 208 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 IGLV2-8P01709 118 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 SELENOTP62341 195 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 GNG5P63218 68 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 PATE2Q6UY27 113 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 PAXXQ9BUH6 204 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 LY96Q9Y6Y9 160 aa15.79■□□□□ 0.12
COL13A1-201ENST00000354547 AMMECR1Q9Y4X0 333 aaPredicted RBP15.78■□□□□ 0.12
COL13A1-201ENST00000354547 DCHS2Q6V1P9 2916 aa15.78■□□□□ 0.12
COL13A1-201ENST00000354547 CNTFRP26992 372 aa15.78■□□□□ 0.12
COL13A1-201ENST00000354547 A0A1W2PRE2 83 aa15.78■□□□□ 0.12
COL13A1-201ENST00000354547 CACNG8Q8WXS5 425 aa15.78■□□□□ 0.12
COL13A1-201ENST00000354547 CHODLQ9H9P2 273 aa15.78■□□□□ 0.12
COL13A1-201ENST00000354547 WASHC3Q9Y3C0 194 aa15.78■□□□□ 0.12
COL13A1-201ENST00000354547 PAM16Q9Y3D7 125 aa15.78■□□□□ 0.12
COL13A1-201ENST00000354547 A0A1W2PPI3 338 aa15.77■□□□□ 0.12
COL13A1-201ENST00000354547 PPOXP50336 477 aa15.77■□□□□ 0.12
COL13A1-201ENST00000354547 CX3CL1P78423 397 aa15.77■□□□□ 0.12
COL13A1-201ENST00000354547 ZNF705AQ6ZN79 300 aaPredicted RBP15.77■□□□□ 0.12
COL13A1-201ENST00000354547 OR1B1Q8NGR6 318 aa15.77■□□□□ 0.12
COL13A1-201ENST00000354547 TMEM167AQ8TBQ9 72 aa15.77■□□□□ 0.12
COL13A1-201ENST00000354547 RNASE6Q93091 150 aaKnown RBP15.77■□□□□ 0.12
COL13A1-201ENST00000354547 A0A1W2PN81 502 aa15.77■□□□□ 0.11
COL13A1-201ENST00000354547 PMCHP20382 165 aa15.77■□□□□ 0.11
COL13A1-201ENST00000354547 LOXP28300 417 aaPredicted RBP15.77■□□□□ 0.11
COL13A1-201ENST00000354547 KRTDAPP60985 99 aa15.77■□□□□ 0.11
COL13A1-201ENST00000354547 TMEM30BQ3MIR4 351 aa15.77■□□□□ 0.11
COL13A1-201ENST00000354547 LINC00305Q7Z4B0 112 aa15.77■□□□□ 0.11
COL13A1-201ENST00000354547 GSX1Q9H4S2 264 aaPredicted RBP15.77■□□□□ 0.11
COL13A1-201ENST00000354547 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.11
COL13A1-201ENST00000354547 PSMB11A5LHX3 300 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 IGLV2-23P01705 113 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 PRB4P10163 310 aaPredicted RBP15.76■□□□□ 0.11
COL13A1-201ENST00000354547 RCHY1Q96PM5 261 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms