RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 WT1-ASQ06250 92 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 STXBP6Q8NFX7 210 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 OR2T6Q8NHC8 308 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 WFIKKN1Q96NZ8 548 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 MRPL18Q9H0U6 180 aaKnown RBP12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 ZNF705GA8MUZ8 300 aaPredicted RBP12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 SHISA9B4DS77 424 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 GGTLC3B5MD39 225 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 IGHV1-8P0DP01 117 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 APOBEC3AP31941 199 aaPredicted RBP12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 REG1BP48304 166 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 RANP62826 216 aaKnown RBP12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 CX3CL1P78423 397 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 Q0VG73 95 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 C10orf113Q5VZT2 155 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 BEND2Q8NDZ0 799 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 SLC25A2Q9BXI2 301 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 CTSZQ9UBR2 303 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 CDC42EP3Q9UKI2 254 aa12.5□□□□□ -0.41
TNFSF13-202ENST00000349228 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 IGHV1-69-2A0A0G2JMI3 117 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 CGB1A6NKQ9 187 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 CRISP2P16562 243 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 UBE2L3P68036 154 aaKnown RBP12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 PRSS8Q16651 343 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 TMEM133Q9H2Q1 129 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 PRO1933Q9H354 126 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 FRYQ5TBA9 3013 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 SVILO95425 2214 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 A8MWP6 167 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 E7EQL1 145 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 FCN1O00602 326 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 TPPP2P59282 170 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 ZNF664Q8N3J9 261 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 CMTM2Q8TAZ6 248 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 NPIPB3Q92617 1050 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 IGF2BP2-AS1Q96M15 143 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 PAXXQ9BUH6 204 aa12.49□□□□□ -0.41
TNFSF13-202ENST00000349228 CBLN1P23435 193 aa12.48□□□□□ -0.41
TNFSF13-202ENST00000349228 PAX2Q02962 417 aa12.48□□□□□ -0.41
TNFSF13-202ENST00000349228 OR5I1Q13606 314 aa12.48□□□□□ -0.41
TNFSF13-202ENST00000349228 TMEM256Q8N2U0 113 aa12.48□□□□□ -0.41
TNFSF13-202ENST00000349228 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
TNFSF13-202ENST00000349228 MS4A10Q96PG2 267 aa12.48□□□□□ -0.41
TNFSF13-202ENST00000349228 VKORC1Q9BQB6 163 aa12.48□□□□□ -0.41
TNFSF13-202ENST00000349228 FNDC4Q9H6D8 234 aaPredicted RBP12.48□□□□□ -0.41
TNFSF13-202ENST00000349228 E7EUB6 86 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 CORTO00230 105 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 RBP4P02753 201 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 CRYGCP07315 174 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 COMPP49747 757 aaPredicted RBP12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 TBR1Q16650 682 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 C22orf15Q8WYQ4 148 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 SPXQ9BT56 116 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 CHRDL1Q9BU40 450 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 IGLV2-8P01709 118 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 CD3EP07766 207 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 IER3P46695 156 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 FAM231DQ6ZW35 169 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 DMRTC2Q8IXT2 367 aaPredicted RBP12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 OR8I2Q8N0Y5 310 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 TRGV9Q99603 122 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 RALYQ9UKM9 306 aaKnown RBP12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 MSRB2Q9Y3D2 182 aa12.47□□□□□ -0.41
TNFSF13-202ENST00000349228 IGKV1D-37A0A075B6S9 117 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 SNURFLB1AK76 121 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 DIAPH2-AS1Q14236 149 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 IBA57Q5T440 356 aaKnown RBP12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 RASL11AQ6T310 242 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 C11orf42Q8N5U0 333 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 SMIM12Q96EX1 92 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 PERPQ96FX8 193 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 NDUFAF3Q9BU61 184 aa12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 AMMECR1Q9Y4X0 333 aaPredicted RBP12.46□□□□□ -0.41
TNFSF13-202ENST00000349228 PATE2Q6UY27 113 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 NAGKQ9UJ70 344 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 RNF24Q9Y225 148 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 TRAV5A0A0B4J249 113 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 A0A1W2PPI3 338 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 ENSAO43768 121 aaKnown RBP12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 SCGB1D1O95968 90 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 HLA-DQA1P01909 254 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 CRYGBP07316 175 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 RPL27AP46776 148 aaKnown RBP12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 TMEM190Q8WZ59 177 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 RNF5Q99942 180 aa12.45□□□□□ -0.42
TNFSF13-202ENST00000349228 IGLC7A0M8Q6 106 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 AMY1AP04745 511 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 MRGPRG-AS1Q2M3A8 158 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 C10orf55Q5SWW7 151 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 ZNF329Q86UD4 541 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 BAGE3Q86Y29 109 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 BAGE2Q86Y30 109 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 TMEM116Q8NCL8 245 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 RNASE7Q9H1E1 156 aaKnown RBP12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 TNFRSF19Q9NS68 423 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms