RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 LINC01356Q8N9X3 169 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 CRIM1Q9NZV1 1036 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 FAM90A9PA6NNJ1 464 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 ZNF585BQ52M93 769 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 TMEM200BQ69YZ2 307 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 MIR17HGQ75NE6 70 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 HIST1H4GQ99525 98 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 A0A1B0GW15 77 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 PAQR4Q8N4S7 273 aaPredicted RBP12.8□□□□□ -0.36
PTPRO-202ENST00000348962 FER1L6-AS1Q8NA97 138 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 OR13C6PQ8NH95 151 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 PRELID3AQ96N28 172 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 TPTE2P1Q5T6R2 138 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 ZNF525Q8N782 197 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 LOC107984156A0A0G2JMH3 177 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 TMEM170BQ5T4T1 132 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 ARL17AQ8IVW1 177 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 C3orf56Q8N813 242 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 SOX21Q9Y651 276 aaPredicted RBP12.8□□□□□ -0.36
PTPRO-202ENST00000348962 C7orf71A4D174 169 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 SELLP14151 372 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 TMEM219Q86XT9 240 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 FAM169BQ8N8A8 192 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
PTPRO-202ENST00000348962 TRAV21A0A0B4J279 112 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 OR11H12B2RN74 326 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 OR11H1Q8NG94 326 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 KIF26BQ2KJY2 2108 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 GRIFINA4D1Z8 144 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 ZNF474Q6S9Z5 364 aaPredicted RBP12.79□□□□□ -0.36
PTPRO-202ENST00000348962 BRD3OSQ6XYD6 125 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 H3BRM9 83 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 JOSD1Q15040 202 aaPredicted RBP12.79□□□□□ -0.36
PTPRO-202ENST00000348962 OR1P1Q8NH06 330 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 RNF114Q9Y508 228 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 DPRXA6NFQ7 191 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 RNASE1P07998 156 aaKnown RBP12.79□□□□□ -0.36
PTPRO-202ENST00000348962 ZNF25P17030 456 aaPredicted RBP12.79□□□□□ -0.36
PTPRO-202ENST00000348962 NHLRC3Q5JS37 347 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 DTX2Q86UW9 622 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 GLMPQ8WWB7 406 aa12.79□□□□□ -0.36
PTPRO-202ENST00000348962 TRGV4A0A0C4DH28 118 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 FAM71F2Q6NXP2 309 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 BPESC1Q9GZL8 116 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 LCTP09848 1927 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 C3orf36Q3SXR2 165 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 Q5BKY6 102 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 DEFB121Q5J5C9 76 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 MUC21Q5SSG8 566 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 ZNF324BQ6AW86 544 aaPredicted RBP12.78□□□□□ -0.36
PTPRO-202ENST00000348962 RPP21Q9H633 154 aaKnown RBP12.78□□□□□ -0.36
PTPRO-202ENST00000348962 IGHV1-3A0A0C4DH29 117 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 ATP5LO75964 103 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 NBL1P41271 181 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 C12orf54Q6X4T0 127 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 RAMP3O60896 148 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 GAS1P54826 345 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 FOXA3P55318 350 aaPredicted RBP12.78□□□□□ -0.36
PTPRO-202ENST00000348962 OR5AN1Q8NGI8 311 aa12.78□□□□□ -0.36
PTPRO-202ENST00000348962 IGKV1-12A0A0C4DH73 117 aa12.77□□□□□ -0.36
PTPRO-202ENST00000348962 OVOL1O14753 267 aa12.77□□□□□ -0.36
PTPRO-202ENST00000348962 IGKV1D-12P01611 117 aa12.77□□□□□ -0.36
PTPRO-202ENST00000348962 NAT1P18440 290 aa12.77□□□□□ -0.36
PTPRO-202ENST00000348962 TMEM155Q4W5P6 130 aa12.77□□□□□ -0.36
PTPRO-202ENST00000348962 CFAP161Q6P656 301 aa12.77□□□□□ -0.36
PTPRO-202ENST00000348962 TEX38Q6PEX7 206 aa12.77□□□□□ -0.36
PTPRO-202ENST00000348962 TBL2Q9Y4P3 447 aaKnown RBP12.77□□□□□ -0.36
PTPRO-202ENST00000348962 GATA3P23771 443 aa12.77□□□□□ -0.37
PTPRO-202ENST00000348962 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
PTPRO-202ENST00000348962 SPSB3Q6PJ21 355 aa12.77□□□□□ -0.37
PTPRO-202ENST00000348962 TRGV11A0A075B6L2 103 aa12.77□□□□□ -0.37
PTPRO-202ENST00000348962 TDGF1P13385 188 aa12.77□□□□□ -0.37
PTPRO-202ENST00000348962 KLRD1Q13241 179 aa12.77□□□□□ -0.37
PTPRO-202ENST00000348962 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTPRO-202ENST00000348962 PRR32B1ATL7 298 aa12.77□□□□□ -0.37
PTPRO-202ENST00000348962 PKIAP61925 76 aa12.77□□□□□ -0.37
PTPRO-202ENST00000348962 DOCK4Q8N1I0 1966 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 TGIF2-C20orf24A0A0A6YYL0 155 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 IGFL3Q6UXB1 125 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 TOMM7Q9P0U1 55 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 B3GALT5-AS1P59052 145 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 SCO2A0A1W2PP80 73 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 MLNRO43193 412 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 SLC25A34Q6PIV7 304 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 SCGB3A1Q96QR1 104 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 CBY1Q9Y3M2 126 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 MUC6Q6W4X9 2439 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 PSPNO60542 156 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 DNAL4O96015 105 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 PSMG4Q5JS54 123 aa12.76□□□□□ -0.37
PTPRO-202ENST00000348962 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 DNLZQ5SXM8 178 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 ZNF414Q96IQ9 312 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 C18orf12Q96KH6 178 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 GPR61Q9BZJ8 451 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 IL36BQ9NZH7 164 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 DOCK7Q96N67 2140 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 MUC21A0A0G2JKD1 596 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 MUC21A0A140T8X8 626 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms